Cobetia sp. AM6: CLAM6_06030
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Entry
CLAM6_06030 CDS
T08724
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe03030
DNA replication
cobe03430
Mismatch repair
cobe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLAM6_06030 (holA)
03430 Mismatch repair
CLAM6_06030 (holA)
03440 Homologous recombination
CLAM6_06030 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobe03032
]
CLAM6_06030 (holA)
03400 DNA repair and recombination proteins [BR:
cobe03400
]
CLAM6_06030 (holA)
Enzymes [BR:
cobe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLAM6_06030 (holA)
DNA replication proteins [BR:
cobe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLAM6_06030 (holA)
DNA repair and recombination proteins [BR:
cobe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLAM6_06030 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
BBO55292
UniProt:
A0A5K7Y747
LinkDB
All DBs
Position
complement(731346..732404)
Genome browser
AA seq
352 aa
AA seq
DB search
MKVYPDKLDEQLNKRLSPVYIVAGDEPLIHQESCDAIRRAARAASVEEREVLHVENGFQW
GRLTESAASMSLFASRKLIELRMGTQSAGQEGSKVLKAYAERIEKDGDILLITAARLDRK
VQQTAWFKALEKVGVFIAVWPVDHSRLGFWIRDRARRHGLELNQDAARLLAERIEGNLLA
ADQELQKLALLHPPGARLDGNAIVQGVEDNARYDVFTLADACLKGEVERSGRIVLGLRGE
GVEPPVILWALTRELRTLLSLRQHLDQGQSFEHACKAQKPMIFDKRRPFYQQALNRLPHK
RLHKLLLFSQRLDMAIKGGMTLPIWDGMVDLALTLAGGRGPLAELPHAYKVV
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtctatcccgacaagctcgacgagcagctcaacaagcgcctgtctcccgtctac
atcgtggccggtgatgagccgctgattcaccaggaaagctgcgacgccatccggcgtgcg
gcgcgcgctgccagtgtcgaggagcgcgaggtactgcatgtcgagaacggctttcagtgg
ggccgtttgaccgagtctgccgccagcatgtctctgttcgcctcgcgcaagctgatcgag
ctgcgcatgggcacccagagtgccggccaggaaggcagcaaggtcctcaaggcctacgcc
gagcgcatcgagaaggatggcgacatcctgctgatcaccgcagcgcgcctcgaccgcaag
gtgcagcagacggcgtggttcaaggcattggagaaggtcggcgtcttcatcgcggtgtgg
ccggtggaccattcccgcctcggcttctggattcgcgatcgcgcccgtcgtcacggcctc
gagctgaatcaggacgccgctcgcctgctggccgagcgcatcgagggcaatctgctggcc
gcggatcaggagctgcagaagctggcgctgctgcacccgccgggcgcacgcctggatggc
aatgccatcgtccagggcgtcgaggacaatgcccgctatgatgtcttcacgctggccgat
gcgtgtctgaagggggaagtcgagcgcagtggccgcatcgtgctcgggctgcggggagaa
ggcgtcgagccgccggtgatcctgtgggcactgacccgcgagctgcgtaccctgctctcg
ctgcgccagcacctcgatcaaggccagagcttcgagcatgcctgcaaggcgcagaagccg
atgatcttcgacaagcgtcgccccttctatcaacaggcgctcaaccgtctgccccacaag
cgcctgcacaagctgctgctgttctcgcagcgactcgacatggcgatcaagggggggatg
acgctgcccatctgggacgggatggtcgatctcgccctgacactcgccggcggacgcggc
ccactggccgaactgcctcacgcctacaaggtggtgtga
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