Cobetia sp. AM6: CLAM6_06620
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Entry
CLAM6_06620 CDS
T08724
Symbol
potD_2
Name
(GenBank) polyamine transporter PotD
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
cobe
Cobetia sp. AM6
Pathway
cobe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLAM6_06620 (potD_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobe02000
]
CLAM6_06620 (potD_2)
Transporters [BR:
cobe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
CLAM6_06620 (potD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
Motif
Other DBs
NCBI-ProteinID:
BBO55351
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All DBs
Position
803901..804965
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AA seq
354 aa
AA seq
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MTTDTLRFAAAIASLLLAGGVQAEDRKLYLFNWTQYMDPEIITAFEEKFGVEVVENYYNS
QPEMVAKLNAGGVSQYDIIVPSSYYVPRLIEMGLVQKLDKDKVPNLANLAEQFRDPVLGE
GLDYAAPYQWGVTGLVYNASTFKEAPKSWSMVFDPTVNDAWPFGLMTGGQVSMGIACAYL
GHGYDCTDLDDWREAARLLIETKHRGNFSGFSDGTPALQQLARKVTHAGLSFNGDYVFYR
EENPDSFSDIKFVIPEEGTEKWVDSMMIPARAPHPELANAFINFILDARVGAQLSNYNYY
ASPNAAAEPYLDEVLTQPPIQPSEEDMARLRFSPSLSGEQLQIFQQLWSEVKAR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgacacgctgcgtttcgctgcggccatcgccagtctgttgctggccggtggc
gtccaggccgaagacaggaagctgtatctcttcaactggacccagtacatggacccggaa
atcatcaccgccttcgaggagaagttcggcgtcgaggtggtcgagaactactacaactcg
cagccggaaatggtcgccaagttgaatgccgggggggtctcccagtacgacatcatcgtg
ccctccagctactacgtaccgcgcctgatcgagatgggcctggtgcagaagctcgacaag
gacaaggtgccgaatctggccaatctcgccgagcagttccgtgatccggtgctgggggag
gggctcgactatgccgcgccctatcagtggggtgtcaccgggcttgtctacaacgccagc
accttcaaggaagcgcccaagagctggtcgatggtgtttgatccgaccgtcaatgatgcc
tggccgttcggtttgatgaccggtggtcaggtcagcatgggcatcgcctgcgcctatctc
ggccatggctatgactgcacggatctcgacgactggcgcgaggccgccaggttgctgatc
gagaccaagcatcgcggcaatttcagcggcttctccgacggcacgcccgcgcttcagcag
ctggcgcgcaaggtcacgcatgccgggctgtccttcaatggcgattatgtgttctaccgg
gaggaaaatccggactccttctctgacatcaagttcgtcatccccgaagagggcaccgag
aagtgggtggattcgatgatgattccggccagggcgccgcacccggagctggcgaatgcc
ttcatcaacttcattctcgatgcccgggtcggcgcgcagctctccaactacaactactac
gccagccccaacgccgcggcagagccgtatctggatgaggtgctgactcagccaccgatt
cagccctccgaagaggacatggcgcgactgcgtttctcaccgagtctctccggcgagcag
ctgcagatcttccagcagctgtggtccgaggtgaaggcgcgctga
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