Cobetia sp. AM6: CLAM6_07320
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Entry
CLAM6_07320 CDS
T08724
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00470
D-Amino acid metabolism
cobe00550
Peptidoglycan biosynthesis
cobe01100
Metabolic pathways
cobe01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CLAM6_07320 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLAM6_07320 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CLAM6_07320 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cobe01011
]
CLAM6_07320 (ddlB)
Enzymes [BR:
cobe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CLAM6_07320 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cobe01011
]
Precursor biosynthesis
Amino acid ligase
CLAM6_07320 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
RimK
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
BBO55421
UniProt:
A0A5K7Y1R7
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All DBs
Position
880397..881398
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AA seq
333 aa
AA seq
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MTVSSSPSGSTGVNPELATRYGRVVVLFGGLSAEREVSLKSGAAVLAALQGAGVDVQGYD
MAHGLAGLEALRPDRVFIAMHGRGGEDGTLQGALELLGIPYTGSGVLASALGMDKLRTKK
LWDIEGLPTPRSCRLAADTDWQSVLETLGTPVVVKPVHEGSTLGIHIVEDAQALQDAWTD
ASRFDAVVMAERFIKGPEYTVSVLDGEVLPAIRIEADSGFYDYDAKYIANTTRYLLPCGL
SAAREAELAEISLKAFNVLGCEGWGRVDVMEDADGAFWLLEVNTSPGMTDHSLVPQSAAH
VGLDFATLVLRILDTTLAERDANDASVAQQSGH
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtctcttcctccccgtccggatcgacaggcgtgaatcctgagctggctacgcgc
tatggacgtgtcgtggtgctgttcggtggcctgagcgccgagcgcgaggtgtcgctcaag
agtggtgcggcggtgctggcggccctgcagggcgcaggcgtcgatgtgcagggctatgac
atggcgcatgggctggccggtctcgaggctttgcgccccgaccgtgtcttcatcgccatg
catggtcgcggcggcgaagatggcaccttgcagggtgcgctggaattgctgggcatcccc
tacaccggcagcggcgtactggcctctgcactgggcatggacaagctgcgcaccaagaag
ctctgggatatcgaaggcttgccgacgccgcgttcctgtcgcctggcggcggacacggac
tggcagtcggtgctcgagacgctcggtacgccggtggtggtcaagccggtgcatgagggg
tcgacactcggcatccatatcgtcgaggacgcccaggcgctccaggatgcctggacggat
gccagccgcttcgatgcggtggtgatggccgagcgtttcatcaagggcccggaatacacg
gtgtcggtattggacggcgaagtcctgccggccattcgcatcgaagccgatagtggcttc
tatgattacgatgccaaatacatcgccaataccacgcgctatctgctgccttgtggtctg
agcgctgcgcgcgaggcggaattggccgagatctcgctcaaggcattcaacgtgctgggc
tgcgagggttggggccgtgtcgatgtgatggaagatgcggacggcgccttctggctgctg
gaagtcaacacctcgccgggcatgactgatcacagcctggtgccgcagtccgcggcacat
gtcgggctcgatttcgccaccctggtactgcgtattctcgacacgactctcgccgagcgg
gacgcaaacgatgcgtcagtcgctcagcagagtggtcattga
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