Cobetia sp. AM6: CLAM6_08290
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Entry
CLAM6_08290 CDS
T08724
Symbol
pbpA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00550
Peptidoglycan biosynthesis
cobe01100
Metabolic pathways
cobe01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLAM6_08290 (pbpA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CLAM6_08290 (pbpA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cobe01011
]
CLAM6_08290 (pbpA)
Enzymes [BR:
cobe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CLAM6_08290 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cobe01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CLAM6_08290 (pbpA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
SURF1
Motif
Other DBs
NCBI-ProteinID:
BBO55518
UniProt:
A0A5K7Y3E2
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All DBs
Position
994766..996628
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AA seq
620 aa
AA seq
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MLVLAGCLLARLLFLQVVEHDIYTTRSDKNRVRVEPLPPTRGLIYDRNGQLLAENRPNYN
LTIVRERAGDLETTLERLVEILDLPPDEVEDFKERSRQRQRPYQPALLMSELSQEQIARL
AVNRYRLPGVEVEAQLLRYYPDAKPLSHTLGYVGRINQAELKTLDKGNYSGTHFIGKTGI
ERFYEEELHGQAGLRKVETNARGRVLRELSRIDPVPGKDLTLTIDRGLQDLAYRLLKGRR
GAIVAIEPETGDILAMASVPGFNSNEFVTGISVKSYRALQNDIDLPLFNRAIRGQYPPAS
TVKPFMSLAGLENGAITTSTTFYDPGYFQLPNDSHKYRNWLRWGHGRVNMRRGIAVSNDT
FFYNVAYRLGIDRISEYMHKFGFGEQTALDVQGALPGLMPSKEWKRNRYDKPWYPGETIS
IGIGQGYWLATPLQLASAEAVLANRGRHVTPHLAKRIGDETVLLPRSEEKPDVVLDNPAW
WDDVIAALEDVVSGREGTARKYVGPGLKYRMAGKSGTAQVFTLGQDQKYNGKELAERLRD
HALFAAFAPVEHPEIAVSVVIENGQGGSSVAGPMARAVTDYWLLPRIDPEAREAALTLAA
ALAPPEAPAGEGEQGEYDAD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtgctggtgctggccgggtgtctgctggcgcggctgctcttcctgcaggtcgtggaacac
gacatctatacgacgcgctcggacaagaaccgtgtgcgtgtcgagcccttgccgcccacg
cgcggcttgatctatgaccgcaatggtcagctgctcgccgaaaaccgtcccaactacaat
ctcaccatcgtgcgcgaacgcgccggtgatctcgagacgacgcttgagcgcctggtcgag
attctcgatctgccgcccgatgaagtcgaagacttcaaggaacgctcgcgtcagcgtcaa
cgcccctatcagcccgccctgttgatgagtgaattgagtcaggagcagatcgcgcgtctg
gccgtcaatcgctatcgcctgcccggcgtcgaggtcgaggcgcagctgctgcgctactac
ccggacgccaagccgctgtcgcataccctgggatacgtggggcgcatcaatcaggccgag
ctcaagaccctcgacaagggcaactattcgggcacccacttcatcggcaagaccggcatc
gagcgcttctatgaagaggagctgcacggtcaggcgggcctgcgcaaggtggaaaccaat
gcgcggggtcgtgtgctgcgtgagctgtcgcggatcgacccggtgccgggcaaggacctg
acgctgaccatcgatcgcggcctgcaggatctcgcctatcggctgctcaaggggcggcgt
ggtgccatcgtggccatcgagcccgagacgggcgacatcctggcgatggcctccgtgccg
ggcttcaactccaatgagttcgtcaccggcatcagcgtcaagagctatcgcgcgctgcag
aatgatatcgacctgccgctgttcaatcgtgccattcgcggccagtacccgccggcctcg
accgtgaagcccttcatgtcgctggcggggctggagaacggtgccatcaccaccagcacc
accttctacgaccccggctatttccagctgcccaatgacagccacaagtatcgcaactgg
ctgcgctgggggcatgggcgggtcaacatgcggcgtggcatcgcggtgtccaatgacacc
ttcttctacaacgtcgcctaccgcctggggatcgaccgcatcagcgagtacatgcacaag
ttcggcttcggtgagcagacggcgctggacgtgcagggcgcgctgcccggcctgatgccg
tccaaggagtggaagcgcaatcgctacgacaagccctggtaccccggcgagaccatctcc
atcggtatcggtcagggctactggcttgccacgccgttgcagctcgcctcagcggaggcc
gtgctggccaatcgcggcaggcacgtgacgcctcacctggccaagcgcatcggtgacgag
acggtattgttgcccagaagcgaggaaaagccggatgtggtgctggacaatccggcatgg
tgggacgatgtcatcgccgcgctcgaggatgtggtcagcgggcgagaaggcacggcgcgc
aagtatgtcgggcccgggctcaagtaccgcatggccggcaagtccggtaccgctcaggtc
ttcaccctcgggcaggaccagaaatacaacggcaaggagctcgcggagcgtctgcgtgac
cacgccctgttcgccgcctttgcgccggtcgagcacccggagattgccgtctccgtggtg
atcgagaacggccagggcggcagctccgtggcgggcccgatggcacgcgccgtcaccgat
tactggctgttgccgcgcattgaccccgaggcgcgtgaggcggcgctcacgctggctgcc
gctctggcacccccggaggcaccggcgggcgagggtgagcaaggagagtacgatgccgac
tga
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