Cobetia sp. AM6: CLAM6_08980
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Entry
CLAM6_08980 CDS
T08724
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe03030
DNA replication
cobe03430
Mismatch repair
cobe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLAM6_08980 (holB)
03430 Mismatch repair
CLAM6_08980 (holB)
03440 Homologous recombination
CLAM6_08980 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobe03032
]
CLAM6_08980 (holB)
03400 DNA repair and recombination proteins [BR:
cobe03400
]
CLAM6_08980 (holB)
Enzymes [BR:
cobe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLAM6_08980 (holB)
DNA replication proteins [BR:
cobe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLAM6_08980 (holB)
DNA repair and recombination proteins [BR:
cobe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLAM6_08980 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_29
AAA
ABATE
Motif
Other DBs
NCBI-ProteinID:
BBO55587
UniProt:
A0A5K7Y4N7
LinkDB
All DBs
Position
1074573..1075598
Genome browser
AA seq
341 aa
AA seq
DB search
MSASDVSSGVTLSSFSPLPWQHSLWQHFTAVHDNGRLPHAVMLSGPSGLGKHELADAMIA
RVLCRTAQGKPGAAACGECHGCHMLAAGHHPDLMAVAPQDVGKMIRIDPIREVNRFVSQT
AQQGGYRVIRLQPAESMNIASANALLKSLEEPGANTLFILLSDMPSRVLPTIRSRCQQWP
LVIPPAEESLPWLTQQLGEDAQALLRMAGGLPQLAVRLGEAEQRQLRQALRELFDALVRG
GEPVAEAWRLERQPLAQVLWYGIAWLEDLIRMGLSGNASDLRDPSLEPLLRQAVKNGRTQ
DWFKLLDFAREQRRLLAAGGNPNPQLVLEAWLVRWAALLRS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcatcagacgtcagtagtggtgtcacgctttcgagcttctcaccgctgccgtgg
cagcattcgctgtggcaacacttcactgcagtacacgacaacggtcgcctgccgcatgcg
gtgatgctcagcgggccctcggggcttggcaagcatgagctggccgatgcgatgatcgcc
cgcgtgctgtgtcgcaccgcccaaggcaagcccggcgcggcggcctgtggtgaatgtcat
ggctgtcatatgctggcggccgggcatcaccctgatctgatggcggtcgcgccgcaggat
gtcggcaagatgatccgcatcgacccgatccgtgaggtcaatcgcttcgtctcccagacg
gcccagcagggcggctaccgcgtcatccgtctgcaaccggcggagtcgatgaacatcgcc
tcggccaatgccttgctcaagagcctcgaggaacccggcgccaatacgctgttcattctg
ctcagcgacatgccgtcacgggtgctgccgaccattcgctcgcgctgtcagcaatggccg
ctggtgattccaccggccgaagagagcctgccgtggctcacgcagcagctgggcgaggat
gctcaggccctgctgcgcatggcgggcggactgccgcagctggcggtgcgtcttggcgag
gcggagcagcgtcagctgcgtcaggccttgcgcgagctgttcgatgcgctggtgcgcggt
ggtgagccggtggccgaggcgtggcgactggagcgccaaccgctggcgcaggtgctgtgg
tacggtattgcctggctggaagacctgattcgcatgggcctgtccggcaacgccagtgac
ctgcgtgaccccagtctcgagccgctgctgagacaggcggtcaagaacgggcgcacccag
gactggttcaagctgctggacttcgcccgcgagcagcgccgtctgctggccgcgggcggc
aaccccaacccacagctggtgctggaagcctggctggtgcgttgggccgccttgctacgc
tcctga
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