Cobetia sp. AM6: CLAM6_09820
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Entry
CLAM6_09820 CDS
T08724
Symbol
slt
Name
(GenBank) murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cobe01011
]
CLAM6_09820 (slt)
Enzymes [BR:
cobe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CLAM6_09820 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
cobe01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CLAM6_09820 (slt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
TPR_CcmH_CycH
TPR_2
SLT_4
Motif
Other DBs
NCBI-ProteinID:
BBO55671
UniProt:
A0A5K7Y2B1
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All DBs
Position
complement(1171023..1173005)
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AA seq
660 aa
AA seq
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MTPGKQTLRSRGSRRFAALRHLTGLGLLLGLSLPLQAATPSDQSFRAAFDDARAKRFDEI
QQVAVNGHVLEGYIEYHQLKARLPYATAAEVLSFIERHADSPLAEWMRGQAISAYGRTGR
HDALLEVSDGVPAGAQRQCYYYTAQLSNDVASASQGGLKLWHVSGSQDSACDPLFSALRE
RGVIDDQAIWERAMLAWAAGQGGMVSYLERQLPSSWQRAIAAREQLEGNFAAITRLPTNL
GHGGHAFAALSVAAMHGFVRADTEAALEAWRKVNPHMPMSDEQHHTVERDLAWYSLVRDI
PNNRGWVDQRLTILDDEELFDLRMRNAVRDGDWPQVREWVLKMPDRFRNEARYQYWLGRA
DDSLGRPQEARAAWTRAATERNFYGFLAADRIGQAYSLNRDDQDFSDAELAEVAETPAVK
RVRALMNIDEIGLARSEWFNAVTQADDADARRLAAYALQQKWYDLTVFATIRGQLWDGLS
WRFPPAWQQDFQRFGADAGVDPWMLMALARRESAFNPTATSPVGARGLMQLMPGTAAQVS
RGLGLPTPSNAALGDPVTNIRLGSTYIREMLDRYSGNRLAAAAAYNAGPGRVDRWLADTP
GEYDRFVERIPFKETREYVKAVLAYRVIFESLAKGTSEGVKVVSDREVSQRYTTALVDRR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccaggcaagcaaacactccgatcccgtggcagccgtcgcttcgcggcgctgcgg
cacctcaccggcctaggcctgctgttgggactgagcctgcccctgcaggccgccactccc
agtgaccagagcttccgcgccgccttcgatgatgcgcgcgccaagcgttttgacgagatt
cagcaggtcgccgtcaatggccacgtgctggagggctacatcgaatatcaccagctcaag
gcccgcctgccgtacgccaccgccgcggaagtgctgtccttcatcgagcgtcatgcggac
tcgccgttggccgagtggatgcgaggccaggcgatctccgcctacgggcgtaccggccgt
catgatgccctgctggaagtcagcgatggcgtgccggccggcgcgcagcgccagtgctat
tactacacggcgcagctgagcaatgatgtcgcgagcgcatcgcaaggcggcctgaagctc
tggcatgtctccggctcgcaggactcggcctgtgacccgctgttctcggcgttgcgcgag
cgtggcgtgatcgatgatcaagccatctgggaacgcgccatgctcgcctgggctgccggc
cagggtggcatggtcagctatctcgagcgccagctgcccagcagctggcagcgggccatc
gcggcacgcgaacagctggagggcaactttgccgccatcacgcgcctgccgaccaacctc
ggccacggcggccatgccttcgccgccttgagcgtcgctgccatgcatggcttcgtacgt
gccgacaccgaggccgcgctggaagcctggcgcaaggtgaatccgcacatgccgatgagt
gatgagcagcaccacaccgtcgaacgcgacctggcctggtattcactggtacgtgacatc
cccaacaaccgcggctgggtcgatcagcgcctgaccatcctcgatgacgaggagctgttc
gatctgcgcatgcgcaacgcggtacgcgatggcgactggccgcaggtgcgtgaatgggtg
ttgaagatgccggaccgcttccgcaacgaagcccgctaccagtattggctggggcgtgcc
gatgacagcctgggccgcccgcaggaagcacgcgccgcctggacgcgcgccgcgaccgag
cgcaacttctacggcttcctggccgccgaccgtattgggcaggcctactcgctcaatcgc
gatgaccaggacttctccgacgcggaactggccgaggtcgccgagacgccggccgtcaag
cgtgtcagggcgctgatgaacatcgacgagatcggtctggctcgctccgagtggttcaac
gccgtcacccaggcggatgacgccgatgcacgccgtctcgcagcctatgcactgcagcag
aaatggtatgacctgaccgtcttcgccaccatccgcggccagttgtgggatggcctttcc
tggcgcttcccgccggcctggcagcaggacttccagcgcttcggtgccgatgccggcgtc
gacccgtggatgctgatggcactcgcgcgtcgcgagagcgccttcaaccccaccgccacc
tcgccggtgggcgcacgcggcctgatgcagctgatgccgggcaccgccgctcaggtcagt
cgcggcctgggcctgcccacgcccagcaacgcggcgctgggtgatccggttaccaatatc
cgtcttggcagcacctacatccgcgagatgctggaccgctactcaggcaaccgcctggct
gccgccgcggcctacaacgccgggccgggacgcgtcgatcgttggctcgccgacaccccg
ggcgaatacgaccgcttcgtcgagcgtatccccttcaaggagacccgcgaatacgtcaag
gccgtgctggcctaccgcgtgatcttcgaaagcctggccaaaggcaccagcgagggcgtc
aaggtggtcagcgaccgcgaagtcagccagcgctacaccaccgcgctagtggatcgccgc
tga
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