Cobetia sp. AM6: CLAM6_10290
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Entry
CLAM6_10290 CDS
T08724
Symbol
trpI
Name
(GenBank) HTH-type transcriptional regulator TrpI
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobe03000
]
CLAM6_10290 (trpI)
Transcription factors [BR:
cobe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CLAM6_10290 (trpI)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_20
HTH_5
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BBO55718
UniProt:
A0A5K7Y3Z3
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Position
complement(1233239..1234162)
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AA seq
307 aa
AA seq
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MERTELLPPLNALRTFDVAARHESASRAAEELHVTHGAVSRQIRQLEDALGTRLFDRAGR
GLTLTQAGRELATATRHHLGGLARVCGALARSDARAPFVLSCPGSFLARWFIPRLGALKD
ALPELELHLTASDDNEGLRNGVDGVLRFQTPPFDDAEHQETRVLGTERIGPVLRPDSEWL
SEASSPPSPEVLLGLPLLHTRSRPQAWPDWCSRQGLSSEGLDYAQGFEHLNYLLEATLVG
LGVGIAPDYLVEEDLRSKRLVAPWGFVETEACLTLTLPQVGRARARHPHAEALGEWLARE
LATAPPH
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcaccgagctactgcctcccctcaatgccctgcgcaccttcgatgtggcagct
cgccatgagagcgcctcgcgcgccgcagaggaactgcatgtgacccacggggccgtcagc
cgtcagatccgccagctggaagacgcactcggcacacgcctgttcgatcgcgccgggcgg
ggcctgacgctgacacaggccggccgtgagctggcgaccgcgacccgtcatcaccttggc
ggtctggcacgcgtatgcggggcactggcacgcagtgatgcgcgggcgcccttcgtgctg
agctgcccggggtcgtttctggcacgctggttcattccgcgactgggggcactcaaggac
gccctgccggaactcgagctgcacctgaccgccagtgatgacaacgaagggctgcgcaat
ggcgtggacggtgtcctgcgcttccagacgccgccctttgatgacgccgagcatcaggag
acgcgcgtgctgggcaccgagcgcatcgggcccgtcctgcggcccgacagcgagtggctg
agcgaggcatccagtcccccttcccccgaggttctgctgggcctgcccctgctgcatacc
cgatcacgcccgcaagcctggccagattggtgctcacgccagggactatccagtgagggg
cttgattacgcgcaaggtttcgagcacctcaactacctgctcgaggcgacactggtcgga
ctgggcgtcggcatcgcgccggactatctggtggaggaagacctgcgcagcaagcgtctc
gtggccccctgggggttcgtcgagaccgaggcatgcctgacgctgacattgccgcaggtc
ggccgcgctcgtgctcgccacccgcatgccgaggcgctgggcgaatggcttgcccgggag
ctggcgacggcaccgccccactag
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