Cobetia sp. AM6: CLAM6_11680
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Entry
CLAM6_11680 CDS
T08724
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cobe
Cobetia sp. AM6
Pathway
cobe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLAM6_11680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobe02000
]
CLAM6_11680
Transporters [BR:
cobe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CLAM6_11680
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
BBO55857
UniProt:
A0A5K7Y5D2
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All DBs
Position
1393937..1395073
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AA seq
378 aa
AA seq
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MSVINQFTASFTTSRPGMPLRSLLAVAVAAAGMSAGAAQAETLNIVSWGGAYTDSQNKAY
HEPWEEKSGDTVVNIDKSSNALSGLRAQVQAGNVTWDLVDMLPSDALIACSEGLIEPLDP
DTLFAAAPDGTPASEDFIENSLSECFVPQIVYSNIVAFNTEMFPEDKQPDSIDDVFNLEE
FPGKRALQKKPINNMEWALVADGVAPEDVYEMLDSEEGIERAFAKLDTIKDSVIWWEEGA
QPPQLLADKEVAFASAYNGRIFDAEVNEKQPFSIVWDAQVFELDGWVVPTGKLDKVKDYL
MFATDTQRLADQAKYISYGPARTSSAALVSTHADTGIDMKPHMPTYGPNFETAIPKDDEF
WADNLDELSQRFNAWLAR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcatcaatcagttcaccgcgtcattcactacctcgcgcccgggcatgccgctg
cgcagcctgctggcggttgccgtggcagcggccggcatgagcgccggagcggcccaggcc
gagacgctcaatatcgtctcgtggggcggcgcctataccgacagccagaacaaggcctat
cacgagccctgggaagagaagagcggcgacaccgtcgtcaatatcgacaagtcatccaat
gcgctgtccggtctgcgcgcacaggtccaggccggcaacgtcacctgggacctggtcgac
atgctgcccagtgatgccttgatcgcctgttcggaaggcctgatcgagccgctggacccg
gacaccctgttcgcggcagcgccggatggcacgccggccagcgaggacttcatcgagaat
tcgctcagcgagtgcttcgtgccgcagatcgtctactccaacatcgtggccttcaatacc
gagatgttccccgaggacaagcagccggattccatcgatgacgtcttcaatctcgaggaa
ttccccggcaagcgtgcgctgcagaagaagccgatcaacaacatggagtgggcgctggta
gccgatggcgtggccccggaagatgtctacgagatgctggattccgaggaaggcatcgaa
cgtgccttcgccaagctcgataccatcaaggacagcgtgatctggtgggaagagggcgca
cagccgccgcagctgctggcggacaaggaagtggccttcgcctcggcctacaacggacgc
atcttcgatgccgaggtcaacgagaagcagccattctccatcgtctgggatgcccaggtc
ttcgagctggatggctgggtcgtcccgaccggcaagctcgacaaggtcaaggattacctg
atgttcgccaccgatacccagcgactggcggatcaggccaagtacatctcctacgggccg
gcgcgtacctcctccgcggcactggtctcgacccatgcggacaccggcatcgacatgaag
ccgcacatgcccacctatggccccaacttcgagaccgccatccccaaggatgacgaattc
tgggccgacaacctcgatgagctgagccagcgcttcaacgcctggctggcacgctga
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