Cobetia sp. AM6: CLAM6_13540
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Entry
CLAM6_13540 CDS
T08724
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobe03009
]
CLAM6_13540
Ribosome biogenesis [BR:
cobe03009
]
Prokaryotic type
ribosomal protein modification factors
CLAM6_13540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
YjiS-like
NatA_aux_su
Motif
Other DBs
NCBI-ProteinID:
BBO56043
LinkDB
All DBs
Position
1617615..1619807
Genome browser
AA seq
730 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVITDQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCV
ARDIPTENIRLSQNNIVDPENRYNQIFKIQVELPEDLSDKDRQGILRSIERCTVKKVVQT
GPGFEIETVDNLDEDAQALLMAEPPEGQSTWIEGKDLPLEQTIANMTGLLNDLGMKIEIA
SWRNIVPHVWSLHIRDAASPMCFTNGKGSTKESALCSALGEFIERLSCNFFYNDQFFGEA
IADSEFVHYPNEKWFQPGPNDEIPEGVLDDYCLEIFNPDGELGGSNLIDTNSGRADRGIV
SLPFTRRSDGETIYFPSNLIENLYLSNGMSAGNTLPEAQVQCLSEIFERAVKREILEQEL
TLPDVPQEVLAKYPEIVEGIEALEAQGFPILVKDASLGGQFPVACVTLMNPKTGGVFASF
GAHPSFEVAIERSLTELMQGRSFEGLNDFMPPTFNSLAVSEPNNFVEHFIDSSGLVSWRF
FSSKTDIEFVEWDFSGSNEEEVANLFGILDEIGKESYMAVHEDLGAPVCRILVPGYSEVY
PVEDLVWDNTNMALDYREDILNLHRLDDDQLADLGERLEESQLDEHMDIKTLIGIEFDEN
TIWGQLTILELKLMINLALGQHEDALDRVEMFLQYNDNTVVRGLYYQAMKAVLEITLDDE
LELEDYLYNFRRMFGEDTIAAVVGSVQGEVRFHGLEPTNMQLEGLDRHLRLIESYQKLHA
HRAALAAKQA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaacctgaggctcgaggcgaaattcgacgacttc
acggtcatcaccgatcagcccatccgctacaagggtgatgggtcggcgccgagcccgttc
gactacttcctggcgtcgtcagcgctttgtgcggcgtacttcgtgaaggtgtactgcgta
gcgcgggacatcccgaccgagaacatccgtctgtcgcagaacaacatcgtcgacccggaa
aatcgctacaaccagatcttcaagatccaggtggagctgccggaagacctctccgacaag
gaccgccagggcatcctgcgctccatcgagcgttgcaccgtgaagaaagtcgtccagacc
ggcccgggcttcgagatcgagacggtcgacaacctcgacgaagacgcccaggcattgctg
atggcggagccgccggaagggcagagcacctggatcgaaggcaaggatctgccgctggag
cagaccatcgccaacatgacgggccttctgaatgatctcggcatgaagatcgagatcgct
tcctggcgcaacatcgtgccgcacgtctggtcgctgcacattcgtgatgccgcctcgccg
atgtgcttcaccaacggcaagggctcgaccaaggagagcgcgctgtgctcggcgctgggc
gagttcatcgagcgcctgagctgcaacttcttctacaacgaccagttcttcggcgaagcc
atcgctgacagcgagttcgtgcattaccccaacgagaagtggttccagccgggcccgaac
gacgagatcccggaaggcgtgctggatgactactgcctggagatcttcaatccggacggc
gagctgggtggttccaacctgattgacaccaattccgggcgtgcggatcgtggcatcgtg
tctctgccgttcactcgtcgctcggatggcgagacgatctatttcccgtccaatctgatc
gagaacctgtacctcagcaacggcatgagcgccggcaacaccttgccggaagcccaggtg
cagtgtctgtccgagatcttcgagcgtgcggtgaagcgcgagattctcgagcaggaactg
accctgccggacgtgccgcaggaggtgctggccaagtatccggaaatcgtcgagggcatc
gaggcactggaagcccagggcttcccgattctggtcaaggacgcctcgctgggcggccag
ttcccggtggcctgcgtgaccttgatgaacccgaagaccggcggtgtcttcgcttccttc
ggcgcgcacccgagctttgaggtcgccatcgagcgcagcctgaccgagctgatgcagggc
cgcagcttcgaagggctcaacgacttcatgccgccgaccttcaactcgctggccgtctcc
gagccgaacaacttcgtcgagcacttcatcgactcatcgggcctcgtttcctggcgtttc
ttcagctcgaagactgacatcgagttcgtcgagtgggacttctccggcagcaatgaagaa
gaagtcgccaacctgttcggtattctcgatgagatcggcaaggaatcgtacatggcggtg
cacgaggatctcggcgcgccggtgtgccgtatcctggtgccgggctattccgaggtctat
ccggtcgaggacctggtgtgggacaacaccaacatggcgctggattaccgcgaggacatc
ctcaatctgcatcgtctcgacgacgatcagctggcggacctgggcgagcgcctcgaagag
agccagcttgatgagcacatggacatcaagacgctgatcggcatcgagttcgacgagaac
accatctggggtcagctgacgattctcgagctgaaactgatgatcaatctcgcgctgggt
cagcacgaggatgcgctggatcgcgtcgagatgttcctgcagtacaacgacaacaccgtc
gtgcgcggcctctactaccaggccatgaaagcggtgctggagatcaccctcgacgatgag
ctggagctcgaggactacctctacaacttccgccgcatgttcggtgaagacaccatcgct
gccgtggtgggctccgtgcagggtgaggtgcgcttccatggcctggagcccaccaacatg
cagctggaagggctcgatcgccacctgcgtctgatcgaaagctaccagaagctgcacgcc
caccgggctgcgctggcggccaaacaggcctga
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