Cobetia sp. AM6: CLAM6_15080
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Entry
CLAM6_15080 CDS
T08724
Name
(GenBank) AraC family transcriptional regulator
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobe03000
]
CLAM6_15080
Transcription factors [BR:
cobe03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CLAM6_15080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_23
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
BBO56197
LinkDB
All DBs
Position
complement(1796050..1796928)
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AA seq
292 aa
AA seq
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MSVTTPVLPSSPGVSTRGPDQVPFSSSVCEHDPDIYEIPASALHVETGQQVMEVPIHQHR
KGQLVIALHGVVTSRVPEGLWMVPPHSGVWIPGNLPHSNHLTRGGRVCHLFIEPGALEMP
SHSCTLSISPLLRELVLRLAELPQPYPEQGPTARLVGVLLEELACMPSERLHLPLPEDPR
LTRISDALIKTPDDRRTLAEWAGELAMSERTLARLIQRDTGLSFSRWRQQLHLVVAIRLL
AEGMSVQRVSEDVGYQSVNAFISMFKKLLGTTPARYLQEREQRRSGSGMGGA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaccacacccgtcctaccgtcatcgcccggggtcagcacccgtggccccgat
caggtgcccttctccagcagcgtctgcgagcacgacccggacatctacgagattccggcc
agcgcactgcatgtcgagaccggccagcaggtgatggaggtgccgatccaccagcatcgc
aagggacagctggtgatcgccctgcatggcgtggtgaccagtcgcgtaccggaaggtctg
tggatggtgccgccgcacagcggggtctggattcccggcaacctgccccacagcaaccac
ctgacccgtggcggccgcgtctgccacctgttcatcgagcccggtgcgctcgagatgcca
agccacagctgcacgctgtcgatctcgcccctgctgcgtgagctggtgttgcgcctggcg
gagctgccccagccgtatcctgaacaggggccgaccgcgcggctggtcggtgtgctgctg
gaagagctggcctgcatgcccagcgaacgtctgcacctgcccttgcccgaagacccgcgg
ctgacccgcatcagcgatgccctgatcaagaccccggacgaccgacgcaccctggccgag
tgggcaggcgaactggcgatgagcgaacgcaccctcgcccggcttatccagcgtgacacc
ggcctgagcttcagccgctggcgtcagcaactgcacctggtggtggcgattcgcctgctg
gccgaaggcatgagcgtgcagcgcgtctcggaagacgtcggctatcagtccgtcaacgcc
ttcatcagcatgttcaagaagctgctcggcaccacgcccgcccgctacctgcaggaacgc
gagcaacgccgctcgggcagtggcatgggcggcgcgtga
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