Cobetia sp. AM6: CLAM6_15660
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Entry
CLAM6_15660 CDS
T08724
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cobe01011
]
CLAM6_15660
Enzymes [BR:
cobe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CLAM6_15660
Peptidoglycan biosynthesis and degradation proteins [BR:
cobe01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CLAM6_15660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
NMB0315_dom_I
LysM_RLK
LysM2_CERK1_LYK3_4_5
LysM_OapA
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BBO56255
UniProt:
A0A5K7YET8
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All DBs
Position
complement(1867072..1868478)
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AA seq
468 aa
AA seq
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MHQQDLRTDGQMAADTPCRVTPTQAPFRPARLRHLIRLASLGATLCLMPLTASANSAMVS
GVSPTSEYQRAPLNFMEAVDAIPAHYDDVWERLRAGYQLQQDTGRPRVRKWISWYQEHPH
HVERIAEQARPWIRYVTLRTEARGLPAELALLPFIESAYDPDAAHPGGATGMWQFMPRTG
DAMGLTRNRWYDGRKDVLLSTDAALDYLETQGERWYDGDWELALAAYNAGAGTVNRARRR
AGGDEDYWNIKLPNETMEYVPKLLALAAVIRDPEEYGLSLPKIDDRPEIAAVETGGQLDL
STAAKLAGISEDELRALNPAYKRWATTPGDSSLVIPATARDTFLSQLATLPEKARQSWAS
YRVKRGDTLSVIARRSGLTLSELKQKNRLSGNTIRIGQALMVPDRGASVATQLASANGEK
KVRVKSGDSLSLIAARHNVSTRQLARWNKLSSADYLRPGQMLTLYSAN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcaagacctccgtaccgacggccagatggccgccgacacgccgtgtcgtgtc
actccgacccaggcccccttccgtccggctcgactgcgtcacctgattcgcctcgcctct
ctgggcgccaccctgtgcctgatgccgctgaccgccagcgccaattcagcgatggtgtcc
ggggtctcgcccaccagtgaatatcagcgcgccccgctgaacttcatggaggccgtcgac
gccattcccgcgcactacgacgacgtctgggagcgactgcgcgccggctatcagctgcag
caggacaccggtcgcccacgcgtgcgcaaatggatcagctggtatcaggagcacccccac
cacgtggagcgtatcgcggaacaggcccgcccctggattcgctacgtgacactgcgcacc
gaagcacgcggcctgccggcagagctggcactgctgcccttcatcgagagcgcctacgat
ccggatgccgcgcatccgggcggtgcgaccggcatgtggcagttcatgccgcgcaccggt
gacgccatggggctgacacgcaaccgctggtatgacggtcgcaaggacgtgttgctgtcc
acggatgccgcgctggattacctggagacccagggcgagcgctggtatgacggcgactgg
gagctggcgctggccgcctacaatgccggtgccggcaccgtgaatcgtgcacgccgccgc
gccggtggcgatgaggattactggaacatcaagctgcccaacgagaccatggaatacgtg
ccgaagcttctggcactggccgcggtgattcgcgaccctgaggaatatgggctctcgctg
ccgaagattgacgacaggccggaaatcgcggccgtcgagacgggcggacaactggacctg
tccaccgccgccaagctggccggtatcagtgaagatgagctgcgcgctctgaacccggct
tacaagcgctgggccaccacgccgggtgacagctcgctggtgattcccgccaccgcccgc
gataccttcctcagccagctggccacgctgcctgaaaaagcgcgccagagctgggccagc
tatcgcgtcaagcgcggcgacaccctgtccgtcatcgcgcgccgcagtggcctgacgctg
tccgagctgaagcagaagaaccgcctctcgggcaacaccatccgcatcggccaggcactg
atggtgccggaccgcggcgcctcggtggccacccagctggcctcggccaacggcgagaag
aaggtgcgcgtgaagagtggcgattccctgtccttgatcgccgcccgtcacaatgtcagc
actcgccagctcgcgcgctggaacaagctgtcatctgcggactacctgcgccccggccag
atgctgaccctttacagcgccaactga
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