Cobetia sp. AM6: CLAM6_15710
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Entry
CLAM6_15710 CDS
T08724
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe03030
DNA replication
cobe03430
Mismatch repair
cobe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLAM6_15710
03430 Mismatch repair
CLAM6_15710
03440 Homologous recombination
CLAM6_15710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobe03032
]
CLAM6_15710
03400 DNA repair and recombination proteins [BR:
cobe03400
]
CLAM6_15710
Enzymes [BR:
cobe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLAM6_15710
DNA replication proteins [BR:
cobe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLAM6_15710
DNA repair and recombination proteins [BR:
cobe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLAM6_15710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BBO56260
LinkDB
All DBs
Position
1872055..1872876
Genome browser
AA seq
273 aa
AA seq
DB search
MRQIILDTETTGIDPKEGHRLIEIGAVEMINRRLTGRTYHQYVNPERLIDAEAIGVHGIT
DERVANEPVFAEIADAFWDFIKGAQLVIHNAPFDVGFIDHEFGLINSGRANPLGPVADHC
AILDTLKLAREKHPGQRNNLDALCKRYDIDNGHRVLHGALLDAEILGDVYLAMTGGQTAL
GLDVIEEGDGEEGGIVGVRRLRADRPRLVTPGLSALELERHSAWCEEIRGKADECLFDRL
SIDALGSLDSASLDGATLEGASLDSRGNRGDDA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagattattctcgataccgaaacgacaggtatcgatccgaaggaaggccatcgc
ctgatcgagatcggcgcggtggagatgatcaaccgccgcctgaccggacgcacctaccat
cagtacgtcaatcctgagcgcttgatcgatgcagaggcgatcggggtacacggcatcacc
gatgagcgagtcgccaacgagccggtcttcgccgagattgccgatgccttctgggacttc
atcaagggtgcccagctggtcatccacaatgcgcccttcgatgtgggcttcatcgatcac
gaattcgggctgatcaattccgggcgtgccaacccgttgggcccggtcgccgatcactgc
gccattctcgataccctgaagctggcccgagagaagcaccccggacagcgcaacaacctg
gatgcgctgtgcaagcgctacgatatcgacaacgggcatcgtgtgctgcacggcgccttg
ctggatgccgagattctcggcgatgtctatctggcgatgaccggtggccagacggcgctg
ggcctggacgtgatagaggaaggcgatggcgaggagggcggtatcgtcggggttcgtcgc
ctgcgtgccgatcgcccacgtctggtcacgcctgggctttccgcgctggaacttgagcgt
cactcggcctggtgtgaagagattcgcggcaaggcggatgagtgcctgttcgatcgcctc
tcgatcgatgccttgggcagtcttgatagtgccagtcttgatggcgccactcttgagggt
gccagtctggacagccgaggcaaccgcggagacgacgcctga
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