Cobetia sp. AM6: CLAM6_16130
Help
Entry
CLAM6_16130 CDS
T08724
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobe03000
]
CLAM6_16130
Transcription factors [BR:
cobe03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CLAM6_16130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
HAD_2
TetR_C_29
TetR_C_30
ToxA_barrel
Motif
Other DBs
NCBI-ProteinID:
BBO56302
UniProt:
A0A5K7Y9Q9
LinkDB
All DBs
Position
1922677..1923360
Genome browser
AA seq
227 aa
AA seq
DB search
MPADSPSSLYAEVRRTRSAELSVPPASSPREQAESRILEAAECVFACHGYRGSTLKQIAE
VAELPKANLLYYFGSKEKLYVHLLEQTLTRWNASLEDISPDDEPREVLEALVRVKLKLAR
QAPQASRLFAAEVISGAPFLRDYLSGDLRDWVQARCDVMKAWMAAGKLREAEPMWVIYLI
WSTTQHYADFAAQIDQLGGAPQSDEDWEQLADFVASTLCDGLCPRQP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcggattctccttcttccctttacgctgaagtccgtcgtacccgtagcgcggaa
ttgagcgtgccgcctgccagctctccgcgtgagcaagccgagagccgtattctcgaggcc
gccgaatgcgtattcgcctgtcacggttatcgcggcagcaccttgaagcagattgcggaa
gtggccgagttgcccaaggccaatctgctctattatttcggctccaaggagaagctctac
gttcacctgctggagcagaccctgacgcgctggaatgcttcgctcgaggatatctcgccc
gatgacgagccacgtgaggtgctggaggcgctggtgcgcgtcaagctcaagctggcacgc
caggcaccgcaggcctcgcgtctgttcgcggcggaggtgatcagtggggcgcctttcctg
cgcgattatctcagtggcgacctgcgcgactgggtgcaggcgcgctgcgatgtcatgaag
gcctggatggccgcgggcaaactgcgcgaggcggagccgatgtgggtgatctacctcatc
tggtccaccactcagcattacgcggatttcgccgcccagatcgatcagctggggggagcg
ccgcagagcgatgaagactgggagcagctggcggatttcgtggccagcacgctatgtgat
ggtctgtgcccgcgacagccatga
DBGET
integrated database retrieval system
