Entry |
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Name |
(GenBank) hypothetical protein
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KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cobe00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLAM6_16240
09124 Replication and repair
03420 Nucleotide excision repair
CLAM6_16240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cobe03021]
CLAM6_16240
03036 Chromosome and associated proteins [BR:cobe03036]
CLAM6_16240
03400 DNA repair and recombination proteins [BR:cobe03400]
CLAM6_16240
Enzymes [BR:cobe01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CLAM6_16240
Transcription machinery [BR:cobe03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLAM6_16240
Chromosome and associated proteins [BR:cobe03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CLAM6_16240
DNA repair and recombination proteins [BR:cobe03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLAM6_16240
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(1932367..1935216)
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AA seq |
949 aa
MIKADETHAEPARYRIAVRELCAFAAREGDLDLRFTPSPTAQQGIRGHQRIVRRRGKDYE
SEISLSGDIGNLTIRGRADGYDPKRNCLEEIKTHRGDLSRQPAHHRALHWAQARVYGALM
CRSRDLEGITLALVYLDIAADAPRGTKSEHDEQNEQNEQTDQADPKSRKAQPDEQRLEAW
WSREALEAELARLAARFSEFAANELAHRSARDSALSRLAFPWPSWRPGQRQLAEHAYKAV
MTGRELLAEAPTGTGKTLATLYPALRAMPASGTDRLFYLTARTPGRALALDALATLAPAA
DDSEGQKKTPATPLRILELGARSKTCEHPSLACHGESCPLARGFYDRLPAARDAALADQR
LLNLATTRRHALAHDICPYFLAQELSRWADVIIGDHNHYFDSHALLFALSQANDWRTVVL
VDESHNLIERARGMYSTELDARQFHFLLKQLSRKGHPAPLRSASRALARQWRALEQLKQG
ADGETQASKVDSKDEGHKAQRLALEALPGDFLKALSQWTGAMGDWLAEPDKAANPAAARQ
QPATATQAPEQLGLIASDAPSAAPSATDTGTATTVSGSASSTARRRVEPDVEMMEAYFAA
LTLARLAEGFGDHSLFEVELSATPPARQASLASDSSSSSGAASDAGTEADASARPHKARG
RSVRQIQPRLRCVSPAPWLAPRLRASHAILLFSATLNPPAYHHRLLGLADDAVWLSVDSP
FSAAQVQVSRHRLSTRLRDRDASCRPIAELMARQYRQRPGNYLAFFSSFAYLEQVASTLQ
QLAPEIPQWRQTRAMTEAERTGFIQRFTPEGQGIGFAVLGGAFGEGIDLPGSRLIGAFIA
TLGLAGFSPENEALKQRLATWLDNDAQRRSQPEQAEGDPHDDTRAPYPVIQPLNADDCTY
LYPGLTRVVQAAGRVIRSEQDQGVIHLIDDRFMRPEVARLLPRWWSPTN |
NT seq |
2850 nt +upstreamnt +downstreamnt
atgatcaaggcggacgagacccacgctgagcccgcacgctaccggatcgcagtacgcgaa
ctgtgtgcctttgccgcgcgcgagggcgatctggacctgcgcttcacgccatcgcctacc
gcccagcagggcatccgtggtcatcagcgtatcgtgcgccgacgcggcaaggactatgaa
agcgagatctcgctcagcggtgacatcggcaatttgaccatccgtgggcgcgccgatggc
tatgatcccaagcgcaactgcctcgaggagatcaagacccatcgcggcgacctctcccgc
cagcccgcgcaccatcgcgccctgcattgggcccaggcacgcgtctacggcgcactgatg
tgtcgcagccgggacctcgaaggtatcacgctcgcgctggtctatctggacatcgcggcg
gatgcgcccaggggcaccaagagcgagcatgatgagcagaacgagcagaacgagcagact
gaccaggctgaccccaaaagccgcaaggcacagcctgatgagcagcgtctggaagcctgg
tggagccgtgaggcgctggaggcggagctggcacgtctggcggcacgcttcagcgagttc
gccgccaatgagctggcccatcgcagtgcccgcgacagcgcgctgagccgcctggccttt
ccgtggccgagctggcgccccggtcaacgccaactggccgagcatgcctacaaggcggtg
atgaccggccgcgagctgctcgccgaggcgccgaccggtaccggcaagaccctggccacg
ctgtatccggcactgcgcgcgatgcccgcaagcggcacggacagactcttctacctcacc
gcccgcaccccgggccgcgcgctggcactcgacgcgctggccaccttggcaccagccgct
gacgacagcgaggggcagaaaaagacaccggcgacaccgctgcgcattctggaactgggc
gcgcgcagcaagacctgcgagcacccgtccctcgcctgtcatggcgagtcctgcccgctg
gcgcgcgggttctatgatcgcctgcccgcggcacgcgacgccgcgctcgccgaccaacgc
ctcctgaatctggcgacgacacgccgccacgccctggcccacgacatctgcccctacttt
ctcgcccaggagctctcgcgctgggcggatgtcatcatcggcgaccataaccactacttc
gacagtcatgcgctgctgttcgccctgagccaggccaatgattggcgcacggtggtgctg
gtcgatgagagccacaacctcatcgagcgcgcccgcggcatgtacagcaccgagctcgac
gcccgccagttccacttcctgctcaagcagttgagccgcaagggccatccggccccgctg
cgctcggcttcacgcgcactggctcggcaatggcgagcgctggagcagctcaagcagggt
gctgacggcgagacacaggcaagcaaggtcgatagcaaggacgaaggccacaaggcgcag
cgccttgcactggaggcgctacccggcgacttcctcaaggccttgagccaatggaccggc
gcgatgggcgactggttggcggagcctgacaaggccgcaaaccctgctgcggccaggcaa
cagccagcgacagccacacaagcccccgaacagctgggcctgatcgcaagcgatgccccc
tctgctgctccgagtgctaccgatacaggcactgcaacgacagtctccggctcggcctct
tccacggccaggcgccgcgtggaacccgatgtcgagatgatggaggcctactttgcggca
ctgaccctggcgcgactcgccgaaggctttggcgatcactcgctgttcgaggtcgaactc
tccgccacgccccctgcgcggcaggcgtcgcttgccagcgattcaagctcgagttccggc
gcagcatcggatgcaggaacagaagctgacgcgtcagcccggccacacaaggcccgcggg
cgcagcgtgcgccagatccagccgcgactgcgctgcgtcagtccggcgccgtggctggca
ccccgcctgcgcgccagtcacgccatcctgttgttctcggccacactcaatccaccggcc
tatcaccatcgcctgctgggtctggcggacgatgccgtctggctgagtgtcgattccccg
ttcagcgcggcccaggtgcaggtcagtcgtcatcggctctcgacacgcctgcgggatcgc
gacgcctcctgccggccgatcgccgagttgatggcgcgccaataccggcaacgcccgggc
aactatctggcgttcttctcgagcttcgcctatctggaacaggtcgccagcaccctgcaa
cagctggcgccggagattccccaatggcgccagacccgcgccatgacggaagcggagcgc
accggcttcattcagcgcttcacgcccgagggacaaggcatcggcttcgcggtgctgggt
ggcgccttcggcgaagggatcgatctgcccggctcgcgtctgatcggggccttcatcgcc
accctcggactggccggtttcagtcccgagaatgaagcactcaagcagcgtcttgccacg
tggctcgacaacgacgcacagcggcgtagccagccggaacaggctgaaggcgacccacac
gacgatacgcgcgcaccgtacccggtcatccagcccttgaatgccgatgactgcacctat
ctgtacccggggctcaccagagtggtgcaggctgccggccgagtgattcgcagcgagcag
gatcagggcgtgatccacttgatcgatgaccgcttcatgcgcccggaagtcgcacggttg
ctgccacgctggtggtcaccgacgaattga |