Cobetia sp. AM6: CLAM6_16630
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Entry
CLAM6_16630 CDS
T08724
Symbol
potD_3
Name
(GenBank) spermidine/putrescine-binding periplasmic protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
cobe
Cobetia sp. AM6
Pathway
cobe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLAM6_16630 (potD_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobe02000
]
CLAM6_16630 (potD_3)
Transporters [BR:
cobe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
CLAM6_16630 (potD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Lipoprotein_8
NMT1
AcrIIA4
Motif
Other DBs
NCBI-ProteinID:
BBO56352
LinkDB
All DBs
Position
1978249..1979325
Genome browser
AA seq
358 aa
AA seq
DB search
MQGTRFPLRAAGLMAAVSLASVATSAPVLAADDSDKVLYVYNWTEYMPDEVIERFEEQTG
IDVVYSTFDSNEAMYAKLKLLDSDNSYDLVFPSTYYIDKMAREGLLQKLDVSKLDHFEDL
DPNLVDRDFDKGNQYSVPYMWGSAGIGYNPDYVEEGALTSWNDLWNDKYRDKLLLSNDMR
EVFHVALASLGFSGNTTDPDEIKAAYEKLTQLMPNVRAFNSDAARVPFMQGEVDAGLIWN
GEVYQANQEGVPVEYVYPKEGIILWMDTMAIPSNARHVDAAYQFIDYLISPEVSKEISEY
VGYTTPSLAAKNMMDPEVRDNPVVFPTQQDLARGEFQTDVGDALSIYQKYWEQLKTGH
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtacccgtttcccgctgcgtgccgctggcctgatggctgccgtcagcctggct
tccgtggccacatccgcccccgttctggccgcggatgacagcgacaaggtcctttacgtc
tacaactggaccgagtacatgcccgatgaggtcatcgagcgcttcgaagagcagaccggc
atcgatgtcgtctactccaccttcgattccaacgaagcgatgtacgccaagctcaagctg
ctggacagcgacaacagctacgacctcgtcttcccgtcgacctattacatcgacaagatg
gcgcgtgaaggtctgctgcagaagctggatgtcagcaagctcgaccatttcgaggacctc
gaccccaacctggtcgatcgtgacttcgacaagggcaaccagtacagcgtgccttacatg
tggggcagcgccggtatcggttacaacccggactatgtcgaagagggcgcactgaccagc
tggaacgacctgtggaacgacaagtatcgtgacaagctgctgctctccaacgacatgcgt
gaagtcttccatgtcgcactggcaagccttggcttcagtggcaacaccacggacccggac
gagatcaaggcggcctacgagaagctgacccagctgatgcccaacgtgcgtgccttcaac
tccgacgcggcgcgcgtgcccttcatgcagggcgaggtcgatgccggtctgatctggaac
ggtgaggtctatcaggcgaaccaggaaggcgtgccggtcgagtatgtctatcccaaggaa
ggcatcatcctgtggatggacaccatggcgattccgtccaacgcgcgtcacgtcgatgcg
gcctatcagttcatcgattacctgatcagcccggaagtcagcaaggaaatcagcgagtac
gtgggttacaccacgccgagcctggcggccaagaacatgatggacccggaagtgcgtgac
aacccggtggtcttcccgactcagcaggatctcgcccgcggcgaattccagaccgatgtc
ggcgatgcgctgtcgatctatcagaagtactgggagcagctcaagaccgggcattga
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