Cobetia sp. AM6: CLAM6_16860
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Entry
CLAM6_16860 CDS
T08724
Symbol
ruvA
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
cobe
Cobetia sp. AM6
Pathway
cobe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLAM6_16860 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobe03400
]
CLAM6_16860 (ruvA)
DNA repair and recombination proteins [BR:
cobe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLAM6_16860 (ruvA)
RecFOR pathway proteins
CLAM6_16860 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
Transposase_20
IMS_HHH
HHH_8
HHH_3
C2H2-2nd_BIRD-IDD
Motif
Other DBs
NCBI-ProteinID:
BBO56375
LinkDB
All DBs
Position
2009998..2010612
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AA seq
204 aa
AA seq
DB search
MIGRLTGTLLEKQPPQLVLDVQGVGYELEASMNTLLGLPAVGEHCQLYTHLVVREDAQLL
YGFGKEPERRLFRELIKISGVGPRLALAILSGMEQSDFIRCVHDEDSRALTRLPGVGKKT
ADRLIIEMRDRLKHWTLPADDGLDEMARASQPQPPVTHPLADAEAALVSLGYKPVEAAKM
LSGLETGASTEALIKAALARKMAS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgattggacgcctgaccgggacattgctggaaaaacaaccgccgcagctggtgcttgac
gtacagggtgtcggttatgaactggaagcttcgatgaacaccctgttgggcttgccggcc
gtgggcgagcattgccagctttacacccacctggtggtgcgcgaagacgcgcagttgctg
tatggcttcggcaaggagcccgagcgtcgtctgttccgtgaattgatcaagatctccggt
gtcggcccgcgtctggcgctggcgattctgtcgggaatggagcagtccgatttcattcgc
tgtgtgcacgacgaagacagccgggcgctgacacgactgccgggcgtcggcaagaagacg
gcggatcgcctgatcatcgagatgcgtgatcgcctcaagcattggacgctgccggcggat
gatggtctggatgaaatggcgcgtgcctcccagccacaaccgccggtcacccatcctctg
gcggatgccgaagccgcgctggtgtccctgggctacaagcctgtcgaggcggccaagatg
ctctccgggctcgagaccggcgcctccacggaagcgctcatcaaggcggcgctggcgcgc
aagatggccagctga
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