Cobetia sp. AM6: CLAM6_17110
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Entry
CLAM6_17110 CDS
T08724
Name
(GenBank) LysR family transcriptional regulator
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobe03000
]
CLAM6_17110
Transcription factors [BR:
cobe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CLAM6_17110
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BBO56400
UniProt:
A0A5K7Y201
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Position
complement(2040642..2041553)
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AA seq
303 aa
AA seq
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MEIRWLEDFIVLAQTRHFSRAADAQNVSQPTFSRRIKLLEEEMGTTLINRQTLPLSLTPA
GDEFLQLCEQITERVRITRERLQDMAQQQASKISLGAPQSLVSHFLPDWLDQLQLREQVL
PYLRATGWLAADYFHGLDRGECDLALCYWPQARVDLGFELDSYQYLVVGEETFIPLCAPG
ADGNPRHQLPGTRRNPLPFISPHPRAVIATSLMAHLAQVPIQAHLVTMNENIQAANIKAL
VLQGYGIGWLPQRLAAEEIASGKLVRAGDPRWDLSLHIRLYRPRVPRHDSVSELWHQLEA
RFS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcgctggctcgaagatttcatcgttctggctcagacccgacatttctcgcgg
gcagccgatgcacagaatgtctctcagcccaccttttcccgccgcatcaagttgctggaa
gaggagatgggcaccaccttgatcaatcgtcagaccctgccgctgtcgctgactcccgcc
ggagacgagtttctccagctgtgcgagcagatcaccgagcgcgtgcgcatcacacgcgaa
cgcctgcaggacatggcccagcagcaagccagcaagatatcgctgggagcaccgcagtct
ctggtgtcgcacttcctgcctgattggctcgatcagcttcagctgcgtgaacaggtgctg
ccctatctgcgtgccaccggctggctggcggccgactacttccacgggctggatcgcggc
gaatgtgatctggcgctgtgctattggccccaggcacgggtggacctgggctttgagctg
gacagttaccaatacctggtggtcggcgaagaaaccttcattccgctgtgcgcgcctggc
gcggatggcaatccccgtcatcagttgccgggcacgcggcgcaatccgctgccgttcatc
agcccgcatccgcgcgccgtcatcgccacctcactgatggcccatctcgctcaggtcccg
attcaggcgcatctggtcaccatgaacgagaatatccaggcggccaacatcaaggcgctg
gtgttgcagggctatggcatcggttggttgccgcagcggctggccgcagaggaaatcgcc
agcggcaagctggtgcgtgccggtgacccgcgctgggacctgagcctgcatatccgcctg
tatcgcccgcgcgtgccgcgccacgacagtgtcagtgaactctggcaccagctggaagcc
cgtttctcgtga
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