Cobetia sp. AM6: CLAM6_17840
Help
Entry
CLAM6_17840 CDS
T08724
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
cobe
Cobetia sp. AM6
Pathway
cobe02020
Two-component system
cobe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLAM6_17840 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CLAM6_17840 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobe03021
]
CLAM6_17840 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cobe02035
]
CLAM6_17840 (fliA)
Transcription machinery [BR:
cobe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CLAM6_17840 (fliA)
Bacterial motility proteins [BR:
cobe02035
]
Flagellar system
Flagellar assembly proteins
Stator
CLAM6_17840 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
BBO56473
LinkDB
All DBs
Position
complement(2134172..2134930)
Genome browser
AA seq
252 aa
AA seq
DB search
MYTANGRMAQQDIYTEYQPLVRRIALQLQVRLPASVDLEDLIQAGMLGLCECVGRYEQGH
GASFATYASQRIRGAMLDELRSRDWLPRSVRRAGRELESVIQQLEQSLGYPPEETQIAAA
MGLELEDYRRLLLDTNNGMVMSLDEMMDEEGGLAGGHASPEATPFTTPFALPHDALEEAD
TRRALNEAIARLPEREKLLMALYYQEKLNLKEIGAVLDVTESRVSQLHSQAVRRLQGVLA
PHLVARAGKRRR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgccaatgggcgcatggcccagcaggatatctacaccgagtatcagccgctg
gtgcgccggatcgcgctgcagttgcaggtgcgcttgccagcgagtgtcgatctcgaggat
ctgattcaggctggcatgttggggctgtgtgaatgtgtgggccgctatgagcagggccac
ggcgccagctttgccacctatgccagtcagcgcatccgcggcgcgatgctcgatgagctg
cgctctcgtgactggttgccgcgcagtgtgcgccgggctgggcgcgagcttgagagcgtg
attcaacagcttgagcagagcctgggctatccgcccgaggagacccagatcgctgctgcc
atggggcttgaactggaggattatcgccgcctgctgctggacaccaacaacggcatggtg
atgtcgctggacgagatgatggatgaagaaggcgggctggcgggcggtcatgcctcgcct
gaagcgacgcccttcaccacgccgtttgccttgccacatgatgcgctggaagaggccgat
acgcggcgagccttgaatgaggccatcgcgcggctgccggagcgcgagaagctgttgatg
gcgctctattatcaggagaagctcaacctcaaggagatcggcgcggtactcgatgtcacc
gagtcgcgtgtctcgcagctgcattcccaagccgtgcgtcggctgcagggtgtgctggca
ccgcatctggtggcgcgggcgggcaagcgtcgtcgctga
DBGET
integrated database retrieval system
