Cobetia sp. AM6: CLAM6_18640
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Entry
CLAM6_18640 CDS
T08724
Symbol
gabT
Name
(GenBank) 4-aminobutyrate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00250
Alanine, aspartate and glutamate metabolism
cobe00280
Valine, leucine and isoleucine degradation
cobe00310
Lysine degradation
cobe00410
beta-Alanine metabolism
cobe00640
Propanoate metabolism
cobe00650
Butanoate metabolism
cobe01100
Metabolic pathways
cobe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CLAM6_18640 (gabT)
00650 Butanoate metabolism
CLAM6_18640 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CLAM6_18640 (gabT)
00280 Valine, leucine and isoleucine degradation
CLAM6_18640 (gabT)
00310 Lysine degradation
CLAM6_18640 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CLAM6_18640 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cobe01007
]
CLAM6_18640 (gabT)
Enzymes [BR:
cobe01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
CLAM6_18640 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
CLAM6_18640 (gabT)
2.6.1.48 5-aminovalerate transaminase
CLAM6_18640 (gabT)
Amino acid related enzymes [BR:
cobe01007
]
Aminotransferase (transaminase)
Class III
CLAM6_18640 (gabT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BBO56553
UniProt:
A0A5K7Y4X9
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All DBs
Position
2223697..2224983
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AA seq
428 aa
AA seq
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MSHSQLSNEQLDVLKHKYVAKGAVTATPQFADTALNAEIWDADGNRWIDFAGGIGVLNLG
HRHPKVVAAVKAQLDKVMHTAAGVISYAPYVQLSQKLAELTPVRGPERKTLLVNSGAEAV
ENAIKIARAATGRSGVITFDGAFHGRTMMTLAMTGKVLPYKNDFGPMPGDIFRAPYPNPI
HGISEEQSLNAIRTLFKTDLAPHRTAAIVIEPVQGEGGFYIASPSFLTALRELCDEHGIL
LIADEVQSGFARTGKLFAMEHSGVEADIMTMAKSLANGMPLSAVVGTAEVMDSSGPGSLG
GTYSGNPLSCAAALAVIDVIREENILERSTQMGEQLAARFAQWEERFAHVAHSRNQGSMA
AFELVDADGKPDPAATAAVCAKAKELGLILLSCGFYSNSIRVLVPLTVEPEVLEEGLDIV
EKALESLV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagccactctcagctgagcaacgaacaactcgacgtcctcaagcacaagtacgtcgcc
aagggtgccgtcactgccacaccgcagttcgccgacaccgcgctgaacgccgagatctgg
gatgcggacggcaaccgctggatcgacttcgccggtggtatcggcgtgctcaacctgggt
caccgtcaccccaaggtcgtcgccgccgtcaaggcacagctcgacaaggtcatgcacacc
gccgcgggcgtcatctcctacgcgccgtatgtgcaactgagccagaagctggccgagctg
acgccggtgcgtggcccggaacgcaagaccctgctggtcaactccggcgcggaagcggtc
gagaacgccatcaagatcgcacgtgccgccaccggacgcagcggcgtcatcaccttcgac
ggcgccttccacggccgcaccatgatgaccctggcgatgaccggcaaggtgctgccgtac
aagaacgacttcggtccgatgccgggtgatatcttccgtgcgccctacccaaacccgatt
cacggcatcagcgaagagcagtccctgaacgccatccgtaccctgttcaagactgacctc
gcaccgcaccgcaccgccgccatcgtcattgagccggtgcagggcgaaggcggcttctac
atcgcctcgccgagcttcctgaccgccctgcgtgagctgtgtgacgagcacggcatcctg
ctgatcgccgatgaagtgcagtccggcttcgcgcgtaccggcaagctgttcgcgatggag
cacagcggcgtcgaagccgacatcatgaccatggccaagagtctggctaacggcatgccg
ctgtcggccgtcgtcggtaccgccgaggtgatggattcctccggcccgggctcgctgggc
ggcacctacagcggcaacccgctgtcctgcgctgcggccctggccgtcatcgacgtcatc
cgcgaggagaacatcctggagcgcagcacccagatgggcgagcaactggccgcgcgtttc
gcccagtgggaagaacgcttcgcgcatgtcgcgcactcacgcaatcagggttccatggcg
gccttcgagctggtggatgccgatggcaagccggaccccgccgcgacggcggcggtgtgt
gccaaggccaaggagctgggactgatcctgctgtcctgtggcttctactccaactccatc
cgcgtgctggtgccgttgacggtcgagccggaagtgctggaagaaggtctcgacatcgtc
gagaaggcgctggaaagcctcgtctga
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