Cobetia sp. AM6: CLAM6_20880
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Entry
CLAM6_20880 CDS
T08724
Name
(GenBank) ligand-gated channel
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobe02000
]
CLAM6_20880
Transporters [BR:
cobe02000
]
Other transporters
Pores ion channels [TC:
1
]
CLAM6_20880
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BBO56777
UniProt:
A0A5K7Y7P6
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All DBs
Position
2475064..2477019
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AA seq
651 aa
AA seq
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MHLRLHPLTAAVLSASALTLSLSGHASADDMSTLVISEDRLEQNVVISAEEIDQRQARDL
EDLFRAEPGVSVGGGIAIGQKVYVRGLEDTNLNVTIDGARQGGYLFHHTGRLTIDPALLK
QAEVDKGPATADDGPGALGGSLRFETKDAQDLLKPGQDLGARVSVGTESAADATSGTTAF
YGRLGENLGLMGYVSGRNSDDYEVGGGGEQEQTAGQQRGYLLKVSLLDVNDQDLRISAER
TTDHGTYFTRPHMPSFSSQQPTYQEMERETFTVNHAWHPGNDLIDTRTTLYHTTQELDRV
EAGSTSRSREFGADVRNTLRLKTGDVAHALTTGVDFYDQDTRRSDDSGSAGPNNEDTSRN
LGIYAQNRMTLGPWALSVGARLDDYDSDYGEAGSVSGSEVSPNAILSVDATDNLTLHAGY
GEAIRGAKAREVILIGDDVTIAEGLEPERARQREIGLDWHQRDALMAGDRLGFALTGFHT
DIENYQAYDRGSDPAVLYNLEGEVESRGYEASLNWGVGGYDTRLGYAKVVMKNNDGDPLG
DEMNIGASTGDKWTWDHQYRLPNHNVTLGYTLNAVERLDRVAEGDEEKPGYVTHDIRAQW
TPASYQDLTLTLAVNNVFDKRYSDHSSYLLSSGDSMLEPGRDIRLGASYRF
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctccgcctccatccgcttaccgcagccgtcctctccgccagtgcgttgaccctg
agcctctcgggccacgcctcggctgacgacatgtccaccctcgtcatcagcgaagaccgt
ctcgaacagaatgtcgtgatcagcgctgaagagatcgatcagcgtcaggcacgcgacctg
gaagacctgttccgcgccgaaccgggcgtcagtgtcggcggtggcatcgccatcggccag
aaggtctatgtacgcggcctggaagacaccaacctgaacgtcaccatcgatggcgcgcgt
cagggcggctacctcttccaccataccggtcgattgaccattgacccggcactgctcaag
caggcggaagtcgataaaggccccgcgaccgccgatgacggcccgggcgcgcttggcggc
agcctccgcttcgagaccaaggatgcgcaggacctgctcaagcccggccaggacctgggc
gcgcgcgtctcagtcggcaccgaaagtgcggcggacgccacctccggtaccacggcgttc
tatggtcgtctgggggagaatctcggtctgatgggatatgtcagcggccgcaacagcgat
gactatgaagttggcggtggcggtgagcaggaacagaccgcaggtcagcagcgcggctac
ctgctcaaggtgtcactgctggacgtcaatgatcaggacctgcgcatcagcgccgagcgc
accaccgatcacggcacctatttcacgcgtccgcatatgccgagcttcagcagtcagcag
ccgacctatcaggaaatggagcgcgagaccttcaccgtcaatcatgcctggcacccgggc
aatgacctgatcgacaccagaaccaccctctatcacaccacccaggaactggatcgtgtc
gaggccggcagcaccagccgttcccgcgaattcggcgcggatgtccgcaacaccttgcgc
ctcaagacgggtgacgtggcacatgcgctgaccactggcgtggacttctatgatcaggac
actcgtcgctccgatgactcaggcagcgccggccccaacaacgaagacacctcacgcaac
ctgggaatctacgcccagaaccgcatgacgctgggcccgtgggctctgtccgttggtgcg
cggctggatgattacgacagtgattacggcgaggcgggcagcgtcagtggcagcgaggtc
tcccccaacgcgattctgagtgtcgatgccactgacaacctcaccctgcatgcgggctac
ggcgaggccattcgcggcgccaaggcacgtgaagtgatcctgatcggcgatgacgtcacc
atcgcggaggggcttgagccggaacgcgctcgccagcgcgagatcggtctggattggcat
cagcgcgatgccctgatggcgggagatcgcctcggcttcgcgctgaccggcttccatacc
gatatcgagaactatcaggcctatgatcgcggcagtgatccggcggtgctctacaacctg
gagggcgaagtcgagagccgtggctatgaagccagcctgaactggggcgtgggcggctac
gacacgcgcctgggctacgccaaggtggtgatgaagaacaacgacggcgacccgctgggt
gacgagatgaacatcggcgcctccaccggcgacaagtggacctgggatcatcagtatcgc
ttgccaaaccacaacgtcaccctgggctacaccctgaacgcggtggaacgactggatcgg
gtggcagaaggcgacgaggagaagccgggctacgtgacgcacgacatccgcgcccagtgg
acacccgcctcatatcaggatctgaccctgacactggcggtcaacaacgtgttcgacaag
cgctacagcgaccacagcagctacctgctcagcagcggtgacagcatgctcgagccgggc
cgtgacatccgcctgggtgccagctaccgcttctga
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