Cobetia sp. AM6: CLAM6_23440
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Entry
CLAM6_23440 CDS
T08724
Name
(GenBank) TonB-dependent receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobe02000
]
CLAM6_23440
Transporters [BR:
cobe02000
]
Other transporters
Pores ion channels [TC:
1
]
CLAM6_23440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BBO57033
LinkDB
All DBs
Position
complement(2813194..2815215)
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AA seq
673 aa
AA seq
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MTDRLSPCVAASASRATAFTPRPLVAAIALLCASTANAETLQMDTLQIEDDRLNATAVID
SEEIALHQAHDLKDVFRDTPSVTVGGTTASSEMIYVRGLEDTNLNISVDGASQNGYLFHH
SSSFNIEPELLKRAEVQAGPGAADNGPNALGGSIKFVTKDAQDLLEPGETFGGMVKGSTE
SAADAVKGTLSVYGEVAPNAGLLFSTSARNSDDYRTGGGDEEEGTGGHQRSYFGKFSLLD
QGAHSLRISAEHNEDSGIYCTRPNMECQLFNNEKVDTELSRDTYTANYDYEPGSRLVDVH
TNVFHTKTELDRTTVSTGAELNADVESYGGDLNNTFRFGPEDMNNRLTLGSDYVYDESST
GSFDEKARNLALYAQHRMTLGAVDLSFGARVDDYKTEYANGETLDDTDVSPNASLNWRVG
GGVELFTGYSTAVRGNKGREAILADDGVGVGETLTVEPGLEAETSRSTEVGARWKGNDLL
TQRDRAGLEVTYFDTHFDNYITDETVGSETTIYNMEGIVTSKGVEARATYGIGGWDMTLG
YLTMDLEDNQGETVVDDMGLGNQTGDRWSLDNRYTFVDPQMTIGWTVTAYERLTDLPDDQ
SERAGYATHDVYASWVPRDMQDLTLTAGIYNLFDKEYTDQNTYFLEPNDRRGITTGAITS
PGRDVRLSVAYRF
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcgcctctctccgtgcgtggcagccagcgcttcccgcgccactgcattcact
ccgcgtccgctggtggcagccattgcgctgctgtgtgccagtactgccaatgcagagacg
ctgcagatggacacgctgcagatcgaggacgatcgcctcaacgcgaccgcggtcatcgat
agcgaagagatcgcgctgcatcaggcgcatgatctcaaggatgtcttccgtgatacgccg
tccgtcaccgtcggcggcaccaccgcctcatccgagatgatctacgtgcgcggtctggaa
gacaccaacctcaacatcagcgtcgatggtgccagccagaacggctatctgttccaccac
agctccagcttcaacatcgagccggagctgctcaagcgcgctgaagtccaggccggaccg
ggcgccgcggacaacggccccaacgccctgggcggcagcatcaagttcgtcaccaaggat
gcccaggacctgctcgagccgggtgagaccttcggcggcatggtcaagggcagcaccgag
tccgcggcagatgccgtcaagggcacgctgtccgtctacggtgaagtcgcgccgaacgcg
ggcctgctgttctcgaccagcgcacgcaacagcgatgactaccgcaccggcggcggtgat
gaagaggaaggtaccggcggccatcagcgcagctacttcggcaagttcagcctgctcgac
cagggcgcgcacagcctgcgcatcagtgccgagcacaacgaggacagcggcatctactgc
acgcgtcccaacatggaatgtcagctgttcaacaacgagaaggtcgacaccgagctgagc
cgcgacacctataccgccaactatgactatgagccgggctcgcgtctggtggacgtgcac
accaacgtcttccacaccaagaccgagctggaccgcaccaccgtctccaccggcgctgag
ctgaacgccgatgtcgagagctacggcggtgatctgaacaacaccttccgtttcggcccc
gaggacatgaacaaccgtctgacgctgggtagcgattatgtctacgacgaatccagcacc
ggcagcttcgacgagaaggcccgtaacctcgcgctctacgcccagcaccgcatgacgctc
ggcgcggtggacctgtccttcggcgcgcgtgtcgatgactacaagaccgaatacgccaat
ggcgagacgctggatgacaccgatgtcagcccgaacgcgagcctcaactggcgcgtcggc
ggcggtgtcgagctgttcaccggctactccacggcagtacgcggcaacaaggggcgtgaa
gccatcctggccgacgatggcgtcggtgtcggcgagacgctgaccgtcgagccgggtctc
gaggccgagacttcgcgcagcaccgaagtcggcgcgcgctggaagggcaatgacctcctc
acccagcgtgaccgcgctggcctggaagtcacctacttcgatacccacttcgacaactac
atcaccgatgagaccgtcggcagcgaaaccaccatctacaacatggaaggcatcgtcacc
agcaagggtgtcgaggcgcgtgccacctacggcatcggcggctgggacatgacgctgggc
tacctgaccatggacctggaagacaaccagggcgagaccgtggtcgacgacatgggcctg
ggcaaccagaccggtgatcgctggagcctggacaaccgctacaccttcgttgacccgcag
atgacgatcggctggaccgtgaccgcctacgagcgcctcaccgacctgccggatgatcag
agcgagcgcgccggttacgccacgcacgatgtctacgccagctgggtgccgcgtgacatg
caggacctgaccctgacggccggtatctacaacctgttcgacaaggaatataccgaccag
aacacctacttcctggaacccaacgatcgtcgcggcatcacgacgggcgccatcaccagc
ccggggcgtgacgtgcgtctgtcagtggcgtaccgcttctga
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