Cobetia sp. AM6: CLAM6_23590
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Entry
CLAM6_23590 CDS
T08724
Name
(GenBank) hypothetical protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobe03009
]
CLAM6_23590
Enzymes [BR:
cobe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
CLAM6_23590
Ribosome biogenesis [BR:
cobe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLAM6_23590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S4
DUF1062
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
BBO57048
LinkDB
All DBs
Position
complement(2828787..2829500)
Genome browser
AA seq
237 aa
AA seq
DB search
MTEPVRLSKFLAHQQGISRREAEHLIAKGVVRVAGEIVEAPFFKVTDEEVTVDEGASMAP
IEPLTLVWYQPPGTPLPDPLSLRDGAPRSALDNSGADWLKVHFLSQQPLAELGEDESGLA
VWSQNRGVIRKLGDDLDQLEQEYVVEVEGTLDDEGLKRIGFALCADIRGRKPKVSISWQS
DTRLRIAMKRVPVGGIRGAVEEQGLKVIEVRRLRLGAILLGRMAPGEWRFLPVDVRF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccgtccgtctttccaagtttctggcccatcagcagggcatctcgcgccgt
gaggccgagcatctcatcgccaagggggtggtacgtgtcgcgggcgagatcgtggaagcg
cctttcttcaaggtcaccgatgaggaagtcaccgtcgatgaaggcgccagcatggcaccc
atcgagccgctgaccctggtctggtatcagccgccgggcacgccgctgccggacccgctg
agcctgcgtgacggcgcgccgcgcagtgcgctcgacaacagcggtgccgactggctcaag
gtgcatttcctgtcccagcagccgctggccgagctcggcgaagatgaatccggtctcgcg
gtgtggtcacagaaccgtggcgtgatccgcaagctgggcgatgacctcgaccagctggag
caggaatacgtcgtcgaggtggaaggaacactggatgacgaaggcctcaagcgtatcggc
ttcgcgctgtgcgccgacatccgcggccgcaagcccaaggtcagcatcagctggcagagc
gacacccgcctgcgcatcgccatgaagcgggtgccggtgggcggtatccgcggcgcggtc
gaggagcagggcctcaaggtcatcgaggtgcgtcgtctgcgtctgggcgcgattctgctc
ggccgcatggcgccgggcgagtggcgcttcctgccggtcgacgtgcgcttctga
DBGET
integrated database retrieval system
