Cobetia sp. AM6: CLAM6_24180
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Entry
CLAM6_24180 CDS
T08724
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLAM6_24180 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobe03400
]
CLAM6_24180 (ung)
Enzymes [BR:
cobe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CLAM6_24180 (ung)
DNA repair and recombination proteins [BR:
cobe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLAM6_24180 (ung)
Prokaryotic type
CLAM6_24180 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBO57107
UniProt:
A0A5K7Y8J6
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All DBs
Position
complement(2893939..2894649)
Genome browser
AA seq
236 aa
AA seq
DB search
MPLETAATGRSEVLPADWQAHLGQEFQADYMQRLRDFLRAEKDAGKVIYPHSDDWFRAFW
LTPLSNVKVVILGQDPYHGPGQAHGLCFSVRPGVRPPPSLKNIYKELATDVGVEPVDHGF
LESWAKQGVLLLNSVLTVEQGKAASHQKQGWEQFTDRAIDVINQHCQGVVFLLWGSHAQK
KARAVDTQKHLVLHAPHPSPLAAHRGFFGSRHFSQANVWLEARGEKPIDWQLPTSE
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgccgttggagactgccgcgactggccgctccgaggtgttgcctgccgattggcaggcg
catcttggccaagagtttcaggctgactacatgcagcgcctgcgcgactttctgcgcgcc
gagaaagatgctggcaaggtcatctatccgcactccgatgactggtttcgtgccttctgg
ctgacgccgctctccaacgtcaaggtcgtgatcctcgggcaggacccgtatcacggcccg
ggccaggcgcacggactgtgcttctcggtacgccccggcgtacgcccgccgccttcgctg
aagaacatctacaaggaactggccaccgatgtcggcgtcgaacccgtcgatcacggcttc
cttgaaagctgggcgaagcagggcgtcttgctgctcaacagcgtgctgaccgtcgagcag
ggcaaggccgcctcgcatcagaagcaggggtgggagcaattcaccgaccgcgccatcgac
gtgatcaatcagcactgtcagggtgtcgtcttcctgctctggggcagtcatgcccagaag
aaggcccgtgctgtggacacccagaagcacctggtgctccacgcgccgcacccatccccc
ctcgcagcgcaccgcggtttcttcggctctcgccacttctcgcaagccaacgtctggctg
gaagcgcgtggggaaaagccgatcgactggcagttgcctaccagtgagtaa
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