Cobetia sp. AM6: CLAM6_24390
Help
Entry
CLAM6_24390 CDS
T08724
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobe03032
]
CLAM6_24390 (ihfB)
03036 Chromosome and associated proteins [BR:
cobe03036
]
CLAM6_24390 (ihfB)
03400 DNA repair and recombination proteins [BR:
cobe03400
]
CLAM6_24390 (ihfB)
DNA replication proteins [BR:
cobe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CLAM6_24390 (ihfB)
Chromosome and associated proteins [BR:
cobe03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CLAM6_24390 (ihfB)
DNA repair and recombination proteins [BR:
cobe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CLAM6_24390 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BBO57128
LinkDB
All DBs
Position
2917137..2917433
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIEQIAMRQPELSLKDVEAAVRIILDDVTDALAHGGRVEIRGFGSFSLHYREPRL
GRNPKTGEPVDLDGKFVPHFKPGKELREQVDASRALGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgagctgatcgaacagatagccatgcgacagcctgagttgtcgctcaag
gatgtagaggccgcggttcgcatcatcctcgatgatgtgacagacgccctggcccacggc
ggtcgcgtcgagattcgcggtttcggcagcttctcgctgcactaccgtgagccacgactg
gggcgcaaccccaagaccggtgagccggtggacctggatggcaagttcgtcccccacttc
aagcccggcaaggagctgcgcgagcaggtcgatgccagtcgcgccctggggtattga
DBGET
integrated database retrieval system
