Cobetia sp. AM6: CLAM6_24550
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Entry
CLAM6_24550 CDS
T08724
Name
(GenBank) hypothetical protein
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00540
Lipopolysaccharide biosynthesis
cobe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CLAM6_24550
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cobe01005
]
CLAM6_24550
Lipopolysaccharide biosynthesis proteins [BR:
cobe01005
]
Core region
CLAM6_24550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
Glyco_trans_4_4
Glyco_trans_1_2
DUF4127
Motif
Other DBs
NCBI-ProteinID:
BBO57144
UniProt:
A0A5K7Y5F7
LinkDB
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Position
complement(2934181..2935314)
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AA seq
377 aa
AA seq
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MSTGAGKLAAIAIRQVEKNTGASRNAFEQADALRALGYRVVILAERGKPELARSHGAELV
RLWRWPFKGAYRRFWFNRRVQAWASRHAPDLLISHGDCESPDTVYLHNCVHLASQCIHGR
ELPRDHEVAAIHDHVLKGGKFRQVAVNSRMMGEDLMARYGIASERIEISYPGYDPEQFTV
ERARAGRTAQREALGVAEDELLVGLVSSGNFTKRNVAGFVAMAALMEQASPGRYRFLVVG
KDDAAPYQQQAREAGIAERMIWRSTIPEVETLYGALDLFVMPAHIEEFGRVALEAMACGA
PVLLNARVGSAELLDDYPELVMAAESTPQQWAERCTHLLESDTQALSAALASLACNYSHQ
AQNLKLKASFEALMAGR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactggtgcaggcaagctggccgcgatcgccattcgtcaggtcgagaagaatacc
ggtgccagccgcaatgccttcgagcaggcggatgcgttgcgcgcgctgggctatcgcgtg
gtgattctcgccgagcgcggcaagcctgaactggctcgctcccacggcgcggagctggtg
cgcctgtggcggtggcccttcaagggggcgtatcgacgtttctggttcaatcgtcgtgtt
caggcctgggccagccgtcatgcgcccgacctgctgatcagtcatggtgactgcgaaagc
ccggataccgtctatctgcacaattgcgtgcaccttgcctcgcagtgcatccatggccgt
gagctgcctcgcgaccacgaagtggcggcgattcatgatcacgtgctcaagggtggcaag
ttccgtcaggtcgcggtcaattcgcgcatgatgggcgaggatctgatggcgcgctacggt
atcgcgtctgagcggatcgagatcagctacccgggctatgatccggagcaattcacggtc
gagcgtgcgcgcgcagggcgcaccgcccagcgtgaggcattgggcgtggccgaggatgag
ctgctggtcggtctggtgtcatccggcaacttcaccaagcgcaacgtggccggcttcgtg
gcgatggcggcactgatggagcaggcctcaccgggccgctatcgcttcctggtggtaggc
aaggatgatgccgcgccttaccagcagcaggccagggaggcgggcatcgccgagcgcatg
atctggcgctcgaccattcccgaggtcgagacgctctatggtgcgctggacctgttcgtg
atgccggcccatatcgaggagttcgggcgtgtcgcgctggaggcgatggcctgtggtgcg
ccggtgctgctcaatgcgcgggtcggctcggccgagttgctcgatgattaccctgagctg
gtcatggcggcagagtccacaccacagcagtgggccgagcgctgcacccatctgctcgag
agcgatacgcaagcgctgagcgctgcgctggccagtctggcatgcaattactcgcatcaa
gcgcagaatctcaagctcaaggccagcttcgaggccttgatggcggggcggtga
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