Cobetia sp. AM6: CLAM6_25400
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Entry
CLAM6_25400 CDS
T08724
Symbol
liuE
Name
(GenBank) 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy-methyl glutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00280
Valine, leucine and isoleucine degradation
cobe00650
Butanoate metabolism
cobe00907
Pinene, camphor and geraniol degradation
cobe01100
Metabolic pathways
cobe01120
Microbial metabolism in diverse environments
cobe04146
Peroxisome
Module
cobe_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CLAM6_25400 (liuE)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CLAM6_25400 (liuE)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CLAM6_25400 (liuE)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CLAM6_25400 (liuE)
Enzymes [BR:
cobe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
CLAM6_25400 (liuE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
HypF_C_2
Motif
Other DBs
NCBI-ProteinID:
BBO57229
UniProt:
A0A5K7YBE2
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All DBs
Position
3041273..3042199
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AA seq
308 aa
AA seq
DB search
MHFPRKVRIVEVGARDGLQNESVPVATATKLELIRRLSDSGLTHVEAASFVSPRWVPQMA
DHREIMLALRDSHANSTTAKSATTYSALTPNMKGLEAALECGVREVAVFGSASESFSQRN
INCSIAESLERFAPVVEHALKAGVRVRGYVSCVLGCPYEGEIAPAEVAAVARELKAMGCY
EVSLGDTIGVGTPLKAKHMVEQVSREVPIAQLAAHFHDTYGQALANLYAVLEEGIAVIDS
SVAGLGGCPYAKGASGNVASEDVLYLLEGMGIETGVDLAALARTGDWISRTLGRPNGSRV
GQALMASC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcactttccccgcaaggtacgcatcgtcgaggtgggcgcacgcgacggactgcagaac
gagtcggtgccggtcgcgactgccaccaagcttgagttgatccggcgcctgagcgacagc
ggccttacgcatgtcgaggccgccagcttcgtctcgcccagatgggtgccgcagatggcc
gatcaccgcgagatcatgctggcgctgcgcgatagccatgccaattcaacaaccgccaag
tcagcgaccacttactccgctctcacgcccaacatgaaggggcttgaggcggcgcttgag
tgtggtgtgcgcgaagtggccgtattcggctcggccagcgagtccttctcgcagcgcaac
atcaactgctcgatcgccgaatcgcttgagcgctttgcgccagtggtggaacacgccctc
aaggccggtgtgcgtgtgcgcggctatgtgtcctgcgtgctcggctgcccctatgaaggc
gagatagcccccgccgaggtggccgccgtcgctcgcgagctcaaggccatgggctgctac
gaagtctcgctgggcgacaccatcggcgtcggcacgccgctcaaggccaagcacatggtg
gagcaggtcagtcgcgaggtgccgatcgcgcagctcgccgcccacttccacgacacctac
ggccaggcactcgccaacctctacgccgtgctggaggaaggtatcgcggtgatcgacagc
tccgtggcgggcctgggcggctgcccctacgccaagggcgcctcgggcaatgtcgccagt
gaagatgtgctctatctgcttgagggcatgggcatcgagacgggggtggatctggcagcg
ctggcccgcaccggtgactggatcagccgcacgcttgggcgaccgaatggctcacgcgtc
ggtcaggcgctgatggcgagttgttga
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