Cobetia sp. AM6: CLAM6_26200
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Entry
CLAM6_26200 CDS
T08724
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobe03400
]
CLAM6_26200
DNA repair and recombination proteins [BR:
cobe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CLAM6_26200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_22
FtsK_SpoIIIE
AAA
ResIII
T2SSE
AAA_16
AAA_30
AAA_19
AAA_6
TrwB_AAD_bind
CbiA
Zeta_toxin
Hydrolase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBO57309
UniProt:
A0A5K7YBL0
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Position
3135008..3136576
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AA seq
522 aa
AA seq
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MPDVLIGGLAGQGPKGHITLAGALANRHGLVAGATGTGKTVTLQVLAEEFSRMGVPVFTA
DVKGDLSGIAAAGNPHPRVDERLASLGINDWQPQAAPVRLWDLFGKSGHAVRASVASMGP
ELMSTLLELNDTQSGLMHLAFDHAEREGLELIDLKDLISLLKHIEREREGFEERYGSVSP
QSLGAMLRRVHVLATQGGERFFAEPALDINDMLATTGEGDQTRGFINLLDGRELMQSPRL
YTTFLLWFLSTLFRTLPERGDADRPVLVFFFDEAHLLFDAAPKALLERLEQTVRLIRSKG
VGVYFVTQSPADIPDDVLGQLGNRIQHALRAFTPRDQKAVKTAAETFRPNPALDTAQVIT
ELGVGEALVSVLDSKGTPTQVERTLIAPPRGRIGPLSDSERTALLASSSLAGRYDEVIDR
ESAHERLEAQLTSSATAQVRPEETPAATPDTTPPATERDGSAQAAASRDSEQTSPVAESA
PRSGGRQRQGVMETLLKSVMRALGSQLGRTLIRSLLRSFTRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgtgctgatcgggggactcgcaggacagggacccaagggccacatcacgcta
gccggggcactggccaatcgtcacggcctggtcgccggtgcgacaggtaccggcaagacc
gtcacgctgcaggtgctggctgaagagttttcgcgcatgggagtgccggtgttcaccgcc
gacgtcaagggtgacctctccggtatcgccgcggcgggtaacccgcatccgcgcgtcgat
gaacgcctcgccagcctcggcatcaatgactggcagcctcaggccgcgcccgtcaggctg
tgggatctgttcggcaagagcggacatgcggtgcgcgccagcgtggcttccatggggcct
gagctgatgtcgaccctgctggaattgaacgacacccagagtggcctgatgcacctggcc
ttcgatcatgccgagcgtgaagggctggagctgatcgacctcaaggacctgatcagcctg
ctcaagcatatcgagcgtgagcgcgaaggcttcgaggagcgctatggcagtgtcagcccc
cagagcctcggtgccatgctgcgccgggtgcatgtgctggccacccagggcggcgagcgc
ttcttcgccgaaccggcgctcgacatcaatgacatgctggcgaccacgggcgagggagac
cagacacgcggcttcatcaatctgctcgatgggcgtgagttgatgcagagtccacgcctc
tataccaccttcctgctgtggttcctgtcgacgctctttcgcaccctcccagaacgcggc
gatgccgaccgcccggtgctggtcttcttcttcgacgaggcccacctgctcttcgatgcc
gctcccaaggcattgcttgagcgcctcgagcagacggtgcgcctgattcgctccaagggg
gtcggcgtctacttcgtgacccaatcccccgccgacatccccgatgacgtgctcggccag
ctgggcaaccggatccagcatgccctgcgcgccttcactccacgcgaccagaaggccgtc
aagaccgctgccgagaccttccgccccaacccggccctcgatacggctcaggtgatcacg
gagctgggcgtgggcgaggcactggtctcggtgctcgacagcaagggcacgcccacccag
gtggagcgcaccttgatcgcgccgccgcgggggcggatcggcccgttgagtgacagcgag
cgcacagcgctgctggcaagctcatcactggccggtcgctacgatgaggtgatagaccgt
gaatcggctcacgagcgtctcgaggcgcaactgacgagctcggcgacggcccaggttcgg
ccagaggagacaccagcggctacgcctgacaccacgccgcctgccacagaacgggatgga
agcgctcaagccgctgccagccgcgactccgagcaaacaagtccggtggccgaaagcgcc
ccacgctccggtggcaggcagcgtcagggtgtcatggagaccctgctcaagtccgtgatg
cgcgccttggggtcacagctgggacggaccctgattcgcagcctgctgcgctccttcact
cgccgctga
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