KEGG   Cobetia sp. AM6: CLAM6_26320
Entry
CLAM6_26320       CDS       T08724                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
cobe  Cobetia sp. AM6
Pathway
cobe00740  Riboflavin metabolism
cobe01100  Metabolic pathways
cobe01110  Biosynthesis of secondary metabolites
cobe01240  Biosynthesis of cofactors
cobe02024  Quorum sensing
Module
cobe_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:cobe00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CLAM6_26320 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CLAM6_26320 (ribD)
Enzymes [BR:cobe01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CLAM6_26320 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CLAM6_26320 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Rotamase_3
Other DBs
NCBI-ProteinID: BBO57321
LinkDB
Position
complement(3150199..3151353)
AA seq 384 aa
MAHALRLARLGSYTTQPNPRVGCVLVEAETDEVIASGFHVRAGEGHAEVNALAEAGERAL
GCVAYVTLEPCSHTGRTGPCSLALIAAGVSRVVIAMRDPNPQVAGRGIALLQGAGIAVTV
GVMEQEARALNPGFLSRMERGRPFVRLKQAMSLDGRTAMASGESQWITGPEARSAVQRLR
ARSSVVMSGIESVIFDDSRLNVRADQLGLEDHPLGLEALVARQPLRVVVDSHLRLPLAAR
ILAQSGRTLLVCVADETAALAERRTLLEAAGAEVLALPAGEDGRVDLEALLRYLAEHEQA
NEVLLETGAVLAGAMINAGLVDEMQIFMAPTLLGGEARPLLALPGLDHMAQQRRVEIRGI
RAVGRDWRITAVPVASPDPQESGD
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggcccacgccctgcgcctggcacgactgggcagctacacgacgcagcccaatccgcgt
gtcggctgtgtcctggtagaggccgagaccgacgaggtgatcgcgagcggctttcacgtg
cgtgccggggaagggcatgccgaggtcaatgcgctggcagaggcaggcgagcgcgcgctg
ggctgcgtggcctatgtgacgctggagccctgctcccacaccgggcgtaccggcccttgc
tcactggccctgatcgcggcgggcgtctcgcgggtggtgatcgcgatgcgtgatccgaat
ccgcaggttgccgggcgcggcatcgcgctgctgcagggcgcgggcatcgcggtgacggtc
ggggtgatggagcaggaggcgcgagcgctcaatcccggcttcctgtcacgcatggagcgc
ggtcggcccttcgtgcgcctcaagcaggccatgagtctggacgggcgcacggcgatggct
tccggcgaatcccagtggatcaccggccccgaagcgcgcagtgccgtgcagcgtctgcgc
gcgcgctccagcgtggtgatgagcggcatcgagtcggtcatcttcgatgattcgcgtctc
aatgtgcgcgccgaccagctcgggctcgaagaccatccgctggggctcgaggcgctggtg
gcgcgtcagccgttgcgcgtggtggtggacagccatctgcgtctgccgctggcggcgcgc
attctggcgcaatccggtcgtacgctgctggtatgtgtcgcggatgagacagcggcgctg
gctgagcgacgtaccttgttggaggcggccggtgccgaggtgttggcgctgccggccggc
gaagatggacgcgtggacctcgaggccctgctgcgctatctggccgagcacgagcaggcc
aacgaggtgctgctggaaaccggcgcggtgctggccggggccatgattaatgcggggctg
gtcgatgagatgcagatattcatggcaccgacgctgctggggggcgaggctcgcccgctg
ctggcgctgccggggctggatcacatggcgcagcagcgacgggtcgagattcgcggtatc
cgggcggtggggcgtgattggcgcatcaccgcagtgccggtagcatcgccagacccgcag
gagagcggcgactga

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