Cobetia sp. AM6: CLAM6_27110
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Entry
CLAM6_27110 CDS
T08724
Name
(GenBank) hypothetical protein
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAM6_27110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobe03019
]
CLAM6_27110
Messenger RNA biogenesis [BR:
cobe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CLAM6_27110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
BBO57400
LinkDB
All DBs
Position
complement(3241003..3241677)
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AA seq
224 aa
AA seq
DB search
MIDADGFRPNVGIIIANCEGQLLWARRVGQNAWQFPQGGIKPNETPQQALFRELEEEIGL
KAEDVEILACTRGWLRYRLPRRMVRTHSRPICIGQKQKWFLLQIRCQDNRVSVDTTPNPE
FDGWRWVSYWYPLGQVVAFKREVYRRALRELAPRLQRLVDTERLKALAEGPSLHEARGAC
GPSGASGSPVATANAAAKGLDGTGAADSGAGDASSEGHGRHSSG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgctgacggctttcgccccaacgttggcatcatcattgccaactgtgagggc
cagctgctctgggcgcgccgggtaggacagaatgcgtggcagtttccgcaagggggcatc
aagccaaacgagacaccgcaacaggcgctgtttcgtgaactcgaagaagagatcggcctg
aaagctgaggacgtcgagatactggcctgcacccgtggatggctgcgctaccggttaccc
agacgcatggtaagaacgcactcccgaccgatctgcatcggtcagaagcagaagtggttc
ctgttgcagattcgctgtcaggacaaccgcgtaagtgtggataccacgcccaaccctgaa
ttcgatggctggcgttgggtaagctactggtatccgctggggcaggtcgtggccttcaag
cgtgaggtctatcggcgcgccctgcgtgagttggcgccgcgtctgcagcgtctggtggac
accgagcggctcaaggcgctcgccgaggggccatcgctgcatgaggcgcggggcgcctgc
gggccgtctggcgccagtggctcaccggtcgctactgccaacgcggcggccaaggggctc
gatggcacaggtgccgctgactccggagccggtgacgccagctccgagggtcacgggcgt
cattcgtccggctga
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