Cobetia sp. AM6: CLAM6_27250
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Entry
CLAM6_27250 CDS
T08724
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
cobe
Cobetia sp. AM6
Pathway
cobe03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CLAM6_27250 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cobe03011
]
CLAM6_27250 (rpsA)
Ribosome [BR:
cobe03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CLAM6_27250 (rpsA)
Bacteria
CLAM6_27250 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
PCB_OB
DUF5608
Motif
Other DBs
NCBI-ProteinID:
BBO57414
UniProt:
A0A5K7Y632
LinkDB
All DBs
Position
complement(3257501..3259180)
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AA seq
559 aa
AA seq
DB search
MSESFADLFEQSLQDINMEPGAIVSATIVDIDGDWITVNAGLKSEGQIPSEQFRDESGQL
SISIGDEVMVALEAVEDGFGETRLSREKAKRAEAWKELEAAFEKDEIVKGVINGKVKGGF
TVDINTIRAFLPGSLVDVRPVRDTAHLENKELDFKVIKLDAKRNNVVVSRRAVLEAENSA
EREALLATLQEGQQIQGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVAVGDE
INVKVLKFDRERNRVSLGLKQLGEDPWVNIKARYPEGAKINARVTNLTDYGCFAELEEGV
EGLVHVSEMDWTNKNIHPSKVVNVGDDVEVMILDIDEERRRISLGIKQCTTNPWEDFSGK
HNKGDRVSGTIKSITDFGIFIGLEGGIDGLVHLSDISWNEAGEEAVRRYKKGEEAEAVIL
SIDPERERISLGVKQLESDPVSEYLAVNDKGAIVSGRVVDIDAKEVQVELATDVIAILKA
SEISADRVEDARNVLSVGDAVEAKIVGVDRKSRLINLSVKSKDQVEAPRRDAAKPRTQEV
ESNGPTTIGDLIKQQLGQE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagagctttgctgatttatttgaacagtcactccaggacatcaacatggagccg
ggcgcaatcgtgtccgctaccatcgtggatatcgatggcgactggatcactgtcaatgcc
ggtctgaagtctgaaggtcagattccgtctgaacagttccgtgacgaaagtggccagctg
tccatcagcatcggcgacgaagtcatggttgcactggaagccgtggaagatggcttcggt
gagacccgcctgtcccgcgagaaggccaagcgtgccgaagcgtggaaagagctggaagcc
gccttcgagaaagacgagatcgtcaagggcgtgatcaacggcaaggtcaaaggtggcttt
accgtcgacatcaacaccatccgtgccttcctgccgggttctctggtcgatgtccgccct
gtgcgcgacaccgcccacctcgagaacaaggaactggacttcaaggtcatcaagctcgac
gccaagcgcaacaacgttgtcgtgtcccgtcgtgccgtcctcgaagccgagaacagcgct
gagcgtgaagccctcctggccactctgcaggaaggtcagcagattcagggtatcgtcaag
aacctgaccgactacggcgccttcgtcgacctcggcggcgttgacggcctgctgcacatc
accgacatggcatggaagcgcatcaagcatccgtccgagatcgttgctgtcggcgacgag
atcaatgtcaaggtgctgaagttcgaccgcgagcgcaaccgtgtgtctctgggtctcaag
cagctgggcgaagatccgtgggtcaacatcaaggctcgctacccggaaggcgccaagatc
aacgcacgcgtcaccaacctcaccgactacggctgcttcgccgagctggaagagggcgtc
gaaggtctggtccacgtgtccgaaatggattggaccaacaagaacatccacccgtccaag
gtcgtcaatgtcggcgatgacgtggaagtgatgattctggacatcgacgaagagcgtcgt
cgtatctccctgggtatcaagcagtgcaccaccaacccgtgggaagacttcagcggcaag
cacaacaagggcgaccgtgtctccggtaccatcaagtcaatcactgacttcggtatcttc
atcggtctggaaggcggcatcgacggcctggttcacctctccgacatttcctggaacgaa
gctggcgaagaagccgtgcgtcgttacaagaagggcgaagaagctgaagcggtcatcctg
tccatcgatccggaacgtgagcgcatctctctgggcgtcaagcagctcgagagcgatccg
gtctccgagtacctggccgtcaacgacaagggcgctatcgtgtccggtcgtgttgtcgac
atcgatgccaaggaagttcaggtagagctggcgactgacgtcatcgctatcctgaaggct
tctgaaatcagcgctgaccgtgtcgaagacgcacgcaacgtcctgagcgtcggcgatgct
gtcgaagccaagatcgtcggtgtggatcgcaagagccgcctgatcaacctgtccgtcaag
tccaaggaccaggttgaagcaccgcgtcgcgatgctgccaagccgcgtacccaggaagtc
gagagcaacggcccgactaccatcggtgatctgatcaagcagcagctgggtcaggagtga
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