Cobetia sp. AM6: CLAM6_27770
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Entry
CLAM6_27770 CDS
T08724
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00020
Citrate cycle (TCA cycle)
cobe00480
Glutathione metabolism
cobe00720
Other carbon fixation pathways
cobe01100
Metabolic pathways
cobe01110
Biosynthesis of secondary metabolites
cobe01120
Microbial metabolism in diverse environments
cobe01200
Carbon metabolism
cobe01210
2-Oxocarboxylic acid metabolism
cobe01230
Biosynthesis of amino acids
cobe04146
Peroxisome
Module
cobe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cobe_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CLAM6_27770 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
CLAM6_27770 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CLAM6_27770 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CLAM6_27770 (icd)
Enzymes [BR:
cobe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
CLAM6_27770 (icd)
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Gene cluster
GFIT
Motif
Pfam:
Iso_dh
tRNA_synt_1c_R1
SHOCT_2
Motif
Other DBs
NCBI-ProteinID:
BBO57466
UniProt:
A0A5K7Y4P5
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All DBs
Position
complement(3320205..3321467)
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AA seq
420 aa
AA seq
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MGFQKIVVPEGGAKITANSDNTLNVPNNPIIPFIEGDGIGVDVTPAMKIAIDAAVDKAYG
GERKIHWMEVYAGEKATHVYDADTWLPEETLEAVKDYIVSIKGPLTTPVGGGIRSLNVAL
RQKLDLYTCLRPVRWFTGVPSPVKKPADVDMVIFRENSEDIYAGVEWKAGTPEADKVIKF
LREEMGVTNIRFPENCGIGVKPVSEEGTKRLVRQAVQYTIDNDRESLTLVHKGNIMKFTE
GAFKDWGYEIVKDEFGGELLDGGPWMTFKNPNNGKDIVVKDVIADAMLQQILLRPAEYDV
IATLNLNGDYLSDALAAEVGGIGIAPGANLSDTVAMFEATHGTAPKYAGQDKVNPGSVIL
SAEMMLRHMGWVEAADLVLKGVEKAIAKGEVTYDFHRLMDDAKLLKCSEFGQAVADNMDA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggggttccagaagattgtcgtcccggaaggcggtgccaagatcaccgctaattccgac
aataccctcaacgttccgaataatccgatcatcccgttcatcgaaggcgatggtatcggt
gtggacgtgactccggccatgaagattgccatcgacgctgctgtcgacaaggcctatggc
ggcgagcgcaagattcactggatggaagtctacgccggtgaaaaagccactcacgtttat
gatgctgacacctggctgccggaagagactctcgaggctgtcaaggattacatcgtttcc
atcaagggtccgctgaccactccggtgggcggtggtattcgctccctgaacgtcgctctg
cgtcagaagctggatctgtacacctgcctgcgcccggtgcgctggttcactggtgtgccg
agcccggtcaagaagccggctgacgtcgacatggtcatcttccgcgaaaactccgaagac
atctatgccggtgtcgaatggaaggcgggaacgccggaagccgacaaggtcatcaagttc
ctgcgtgaagagatgggtgtcaccaacatccgcttcccggagaactgcggtatcggcgtc
aagccggtctccgaagaaggtaccaagcgtctggtccgtcaggctgtccagtacaccatc
gacaacgaccgtgagtcgctgaccctggtgcacaagggcaacatcatgaagttcaccgaa
ggtgccttcaaggactggggctacgaaatcgtcaaggacgagttcggcggcgagctgctg
gatggcggcccgtggatgaccttcaagaacccgaacaacggcaaggacattgtggtcaag
gacgtcatcgctgacgccatgctccagcagatcctgctgcgtccggcggaatatgacgtc
atcgccaccctgaacctgaacggtgactacctgtccgacgctctggcggcggaagtgggt
ggtatcggtatcgcgccgggtgccaacctgtccgacaccgtcgccatgttcgaagcgact
cacggtactgcaccgaagtacgctggccaggacaaggtcaacccgggctccgtcatcctc
tctgccgagatgatgctgcgtcacatgggttgggtcgaagcggctgatctcgtgctgaaa
ggcgtcgagaaggccatcgccaagggcgaagtcacctatgacttccatcgcctgatggac
gatgccaagctgctgaagtgctccgagttcggtcaggctgttgctgacaacatggatgcc
tga
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