Cobetia sp. AM6: CLAM6_28540
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Entry
CLAM6_28540 CDS
T08724
Name
(GenBank) AsnC family transcriptional regulator
KO
K15782
Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobe03000
]
CLAM6_28540
Transcription factors [BR:
cobe03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
CLAM6_28540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
HTH_11
HTH_CodY
DUF7343
Fe_dep_repress
HTH_20
NirdL-like_HTH
SLH
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
BBO57543
LinkDB
All DBs
Position
complement(3415006..3415509)
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AA seq
167 aa
AA seq
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MSASSSRSQPAPKLDAFDLKILAILERDGRITKSRLAEEINLSVSPCWERVKRLEQAGII
EGYAAIINQQRLSDQQGGAAPGAAPRTPVWVEIHLKHHDAGSFQRFERAMREADEVIECV
AVGGGVDYLLRLETASIDAYQRLVDHWLVSELGIDRYFTYIVTKQVK
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgagttcctcccgctcgcagccagcgccgaagctggatgccttcgatctcaag
attctggcgatactcgagcgcgatggccgcatcaccaagtcgcggctggccgaggagatc
aacctgtcggtcagcccgtgctgggagcgcgtaaagcgcctcgagcaggcaggcatcatc
gagggctatgccgccatcatcaatcagcagcgcctgagtgatcagcagggtggcgctgct
ccgggggctgccccgcgcacgccggtgtgggtcgagatccacctcaagcatcatgatgcc
ggcagcttccaacgcttcgagcgtgccatgcgagaggcggatgaggtgatcgaatgcgtc
gccgtcggcggcggggtggactacctgctgcggctggagaccgccagcatcgatgcctat
cagcgtctggtcgatcactggctggtgtcagagctgggcatcgatcgctatttcacctac
atcgtcaccaagcaggtaaaatag
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