KEGG   Cobetia sp. AM6: CLAM6_30180
Entry
CLAM6_30180       CDS       T08724                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K19789  DNA repair protein RadD
Organism
cobe  Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:cobe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cobe03400]
    CLAM6_30180
DNA repair and recombination proteins [BR:cobe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     CLAM6_30180
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 Zn_ribbon_3 DUF7577 AAA_16 AAA_30 SLFN-g3_helicase DZR zf-tcix DUF3987 AAA_22 Cyclase
Other DBs
NCBI-ProteinID: BBO57707
UniProt: A0A5K7YA39
LinkDB
Position
complement(3637650..3639440)
AA seq 596 aa
MFELRPYQQEAVRRTVEHFRRSDEAAVIVLPTGSGKSLVIAELARIARGRVLVLAHVREL
VEQNHAKYESYGKDADIFSAGLKRKQASRQVVFGSVQSVVRNLDAFTPAEPATDAQAAPF
TLLVIDECHRVSLEKDASYRKVINHLREHNPRLKVLGLTATPYRLGQGFIFHRHYHGMVR
GDDDCFFRDCVFEQPLRLMVRQGFLSEPRRVDVAVARYDFSQLAPGIGGGFQEAELNEVV
QGSRATPGIVLDIVAQARERRGVMVFCSTVEHAEEVTGLLPEGEAALITGETPGEERERL
IHAFKAQQLKYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCL
ILDYAGNPWDLYAPEVATPKPAGDTEIVQVECPVCGNANLFWGRKDGELVVEHFGRRCQG
LVESPEGEGRPLVQCDFRYRAKACPQCGEANDIAARHCHACQARLVDPDDKLRDALKLRD
ARVLRVSGWQLEEARNGRGLPRLKVTYYDEDGTDLSEWFALETSAQRHAFRLSFLARHLR
APGSDWAPKDIAEVLAGEERLKAPDFVIGRKSGRYWQIRDKLFDYAGRYRTGIAAG
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgtttgagctgcgtccgtatcagcaggaggcggtgcggcgtaccgtcgagcactttcgc
cgcagtgatgaggcggcggtcatcgtgctgcccaccggcagcggcaagtcactggtgatc
gcggagcttgcgcgtatcgcgcgtggccgtgtgctggtgctggcgcatgtgcgcgagctg
gtcgagcagaaccacgccaagtacgaatcctatggcaaggacgccgacatcttcagtgcc
ggcctcaagcgcaagcaggcctcgcgtcaggtggtgttcggctcggtgcagtcagtggtg
cgcaacctcgatgccttcacgccggctgagccggcgactgatgctcaggcggcacccttc
acgctgctggtgatcgatgagtgccatcgggtctcgctggagaaggacgccagctatcgc
aaggtcatcaatcacctgcgcgagcacaatccgcgcctcaaggtactgggactgacggcg
acgccgtatcgtctcggtcagggcttcatcttccatcgtcactatcacggcatggtgcgc
ggggatgatgactgcttcttccgtgattgcgtcttcgagcagccgctgcgcctgatggtg
cggcaaggctttctgagtgagccgcggcgtgtcgacgtcgcggtggcgcgctatgacttc
tcgcagctggcgccgggcattggcggcggtttccaggaggcggagctcaacgaggtggtg
cagggctcgcgcgcgacgccgggcatcgtgctggatatcgtcgcccaggcacgcgagcgg
cgcggggtgatggtgttctgctccaccgttgagcatgccgaggaagtcacggggctgctg
cccgagggcgaggcggcgttgatcaccggcgagacacccggcgaggaacgcgagcggctg
atccatgccttcaaggcccagcagctcaagtatctggtcaatgtggcggtgctcaccacc
ggcttcgatgcgccgcatgtcgacctgatcgccatcctgcggcccacggaatccgtcagt
ctctatcagcagatcgtcgggcgcggcctgcgtctgagccccggcaagacggactgtctg
attctcgactacgccggcaatccctgggatctctacgcgccggaggtggcgacgccgaag
ccggccggcgacaccgagatcgtgcaggtcgagtgcccggtgtgcggcaatgccaatctg
ttctggggacgcaaggatggcgagctggtggtcgagcacttcgggcgtcgctgtcagggg
ctggtcgagtcaccggagggtgagggcaggccgctggtgcagtgcgacttccgctatcgc
gccaaggcctgcccgcagtgtggcgaggccaatgacatcgccgcacgtcattgtcatgcc
tgtcaggcacggctggtcgacccggatgacaagctgcgcgatgcactcaagctgcgtgac
gcacgggtgctgcgcgtcagcggctggcagctggaggaggcgcgcaacgggcgcggtctg
ccacgcttgaaggtgacctattacgacgaggatggcaccgatctgtccgagtggttcgcg
ctcgagacctccgcccagcgtcacgccttccgcttgagcttcctcgcgcgtcatctgcgc
gcgccgggcagtgactgggcaccgaaggacatcgccgaagtgctggcgggtgaggagcgt
ctcaaggcgccggacttcgtcatcgggcgcaagagcgggcgttactggcagatccgcgac
aagctgttcgactatgccgggcgctatcgcaccggaatcgccgccggctga

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