Cobetia sp. AM6: CLAM6_30180
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Entry
CLAM6_30180 CDS
T08724
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobe03400
]
CLAM6_30180
DNA repair and recombination proteins [BR:
cobe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
CLAM6_30180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
Zn_ribbon_3
DUF7577
AAA_16
AAA_30
SLFN-g3_helicase
DZR
zf-tcix
DUF3987
AAA_22
Cyclase
Motif
Other DBs
NCBI-ProteinID:
BBO57707
UniProt:
A0A5K7YA39
LinkDB
All DBs
Position
complement(3637650..3639440)
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AA seq
596 aa
AA seq
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MFELRPYQQEAVRRTVEHFRRSDEAAVIVLPTGSGKSLVIAELARIARGRVLVLAHVREL
VEQNHAKYESYGKDADIFSAGLKRKQASRQVVFGSVQSVVRNLDAFTPAEPATDAQAAPF
TLLVIDECHRVSLEKDASYRKVINHLREHNPRLKVLGLTATPYRLGQGFIFHRHYHGMVR
GDDDCFFRDCVFEQPLRLMVRQGFLSEPRRVDVAVARYDFSQLAPGIGGGFQEAELNEVV
QGSRATPGIVLDIVAQARERRGVMVFCSTVEHAEEVTGLLPEGEAALITGETPGEERERL
IHAFKAQQLKYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCL
ILDYAGNPWDLYAPEVATPKPAGDTEIVQVECPVCGNANLFWGRKDGELVVEHFGRRCQG
LVESPEGEGRPLVQCDFRYRAKACPQCGEANDIAARHCHACQARLVDPDDKLRDALKLRD
ARVLRVSGWQLEEARNGRGLPRLKVTYYDEDGTDLSEWFALETSAQRHAFRLSFLARHLR
APGSDWAPKDIAEVLAGEERLKAPDFVIGRKSGRYWQIRDKLFDYAGRYRTGIAAG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagctgcgtccgtatcagcaggaggcggtgcggcgtaccgtcgagcactttcgc
cgcagtgatgaggcggcggtcatcgtgctgcccaccggcagcggcaagtcactggtgatc
gcggagcttgcgcgtatcgcgcgtggccgtgtgctggtgctggcgcatgtgcgcgagctg
gtcgagcagaaccacgccaagtacgaatcctatggcaaggacgccgacatcttcagtgcc
ggcctcaagcgcaagcaggcctcgcgtcaggtggtgttcggctcggtgcagtcagtggtg
cgcaacctcgatgccttcacgccggctgagccggcgactgatgctcaggcggcacccttc
acgctgctggtgatcgatgagtgccatcgggtctcgctggagaaggacgccagctatcgc
aaggtcatcaatcacctgcgcgagcacaatccgcgcctcaaggtactgggactgacggcg
acgccgtatcgtctcggtcagggcttcatcttccatcgtcactatcacggcatggtgcgc
ggggatgatgactgcttcttccgtgattgcgtcttcgagcagccgctgcgcctgatggtg
cggcaaggctttctgagtgagccgcggcgtgtcgacgtcgcggtggcgcgctatgacttc
tcgcagctggcgccgggcattggcggcggtttccaggaggcggagctcaacgaggtggtg
cagggctcgcgcgcgacgccgggcatcgtgctggatatcgtcgcccaggcacgcgagcgg
cgcggggtgatggtgttctgctccaccgttgagcatgccgaggaagtcacggggctgctg
cccgagggcgaggcggcgttgatcaccggcgagacacccggcgaggaacgcgagcggctg
atccatgccttcaaggcccagcagctcaagtatctggtcaatgtggcggtgctcaccacc
ggcttcgatgcgccgcatgtcgacctgatcgccatcctgcggcccacggaatccgtcagt
ctctatcagcagatcgtcgggcgcggcctgcgtctgagccccggcaagacggactgtctg
attctcgactacgccggcaatccctgggatctctacgcgccggaggtggcgacgccgaag
ccggccggcgacaccgagatcgtgcaggtcgagtgcccggtgtgcggcaatgccaatctg
ttctggggacgcaaggatggcgagctggtggtcgagcacttcgggcgtcgctgtcagggg
ctggtcgagtcaccggagggtgagggcaggccgctggtgcagtgcgacttccgctatcgc
gccaaggcctgcccgcagtgtggcgaggccaatgacatcgccgcacgtcattgtcatgcc
tgtcaggcacggctggtcgacccggatgacaagctgcgcgatgcactcaagctgcgtgac
gcacgggtgctgcgcgtcagcggctggcagctggaggaggcgcgcaacgggcgcggtctg
ccacgcttgaaggtgacctattacgacgaggatggcaccgatctgtccgagtggttcgcg
ctcgagacctccgcccagcgtcacgccttccgcttgagcttcctcgcgcgtcatctgcgc
gcgccgggcagtgactgggcaccgaaggacatcgccgaagtgctggcgggtgaggagcgt
ctcaaggcgccggacttcgtcatcgggcgcaagagcgggcgttactggcagatccgcgac
aagctgttcgactatgccgggcgctatcgcaccggaatcgccgccggctga
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