Cobetia sp. AM6: CLAM6_30310
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Entry
CLAM6_30310 CDS
T08724
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00910
Nitrogen metabolism
cobe01100
Metabolic pathways
cobe01120
Microbial metabolism in diverse environments
cobe01310
Nitrogen cycle
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
CLAM6_30310 (nirB)
Enzymes [BR:
cobe01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
CLAM6_30310 (nirB)
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Motif
Pfam:
Pyr_redox_2
NIR_SIR
Pyr_redox
Fer2_BFD
NIR_SIR_ferr
Rubredoxin_C
Pyr_redox_3
DAO
HI0933_like
NAD_binding_8
AlaDh_PNT_C
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
BBO57720
UniProt:
A0A5K7Y550
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Position
3664455..3667112
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AA seq
885 aa
AA seq
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MKHLIIIGNGMVGHHCVEQLIALGATAHYQIHVFGEERHIAYDRVHLSEYFTGRDAESLA
LGTADDYRKAGVTLHLDECVTAIDRDGGHVITTRGRYPYDSLVLATGSTPFVPPIQGLGE
PGSEAAASNRLVYRTLEDLDQIRAAADGKTHGVVVGGGLLGLEAANALKSLGLEAHVVEF
APRLMPVQLDEDGGLALKQHITALGVGVHLNRATTDIVPGEHHQWRMNFSDGEHLETDLI
VFSAGIRPQDALARSASLEIGERGGIIIDDECRTSDPEIFAIGECALWQSRIFGLVAPGY
QMARGVASLLAASAGDAASASQESFRFQGADMSTKLKLLGVDVGSIGDAHGKTEGAISYR
YCDEADGVYRRLIVSRDRKQVLGAVLIGDNSRYDTLLQYVTNGITAPKDPAALILPDASG
EAITLGADALPDSATLCSCHNVSKGDVCSAIDAGNSDLGAIKACTKASTGCGGCAALLKK
VVDAELESRGVEVDRSLCEHFAHTRQELYSLVRVEGIETFAELMASHGRHPDALGCEICK
PAVGSILASCWNAPITESSHIPLQDTNDTFMANMQKNGTYSVVPRIPGGEITPDKLIAIG
EIGKRYNLYTKITGGQRIDLFGAQLHELPDIWSELIAAGFETGHAYGKSTRTVKSCIGST
WCRYGVQDSMAMALTLEDRYKGLRSPHKLKFAVSGCTRECAEAQSKDVGVIATENGWNLY
VCGNGGMRPRHAELFATDLDDESLIRTIDRFLMFYIRTADRLQRTSVWREGLEGGLDYLK
EVILEDSLGLGETLEEQMQQVVDRYECEWANALKSPEKLKRFRSYVNDQRPDPDVVNIVE
RDQIRPASRDELASGNLIISDGGAREAVAEHQPQSTTHLATEVRS
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacctgatcatcatcggcaatggcatggttggccatcactgcgtcgagcagctg
atcgcactgggtgccaccgcgcactaccagattcatgtcttcggcgaagaacgccacatc
gcctacgaccgcgtgcatctctcggagtatttcaccgggcgtgatgccgaatctctcgcg
ctcggcaccgccgacgactaccgcaaggcgggcgtcaccctgcacctcgacgagtgtgtc
accgccatcgaccgcgatggcggccatgtcatcaccacgcgcgggcgctacccctacgac
agcctggtgctggcgaccggctcgacccccttcgtgccgcccatccagggcctcggtgag
ccgggaagcgaggccgccgccagcaatcgtctggtctaccgcaccctggaggatcttgat
cagattcgcgctgccgccgatggcaagacacatggcgtggtggtcggcggtggcctgctg
gggctggaagccgccaatgccctcaagtcactcggcctggaagcgcatgtcgtcgaattc
gcgccacgcctgatgccggtgcagctggatgaggatggcggccttgcgctcaagcaacac
atcactgcgctgggcgtgggggtgcacctcaatcgcgccaccaccgacatcgtgcccggc
gagcaccaccagtggcggatgaacttctccgatggcgagcatctggagaccgacctgatc
gtgttctctgccggcatccgccctcaggacgcgctggcacgcagcgccagcctcgagatc
ggcgagcgcggcggcatcatcatcgatgacgaatgccgcacctcagacccggaaatcttc
gccatcggcgagtgcgccctgtggcaatcgcgcatcttcggtctggtcgcgccgggctat
cagatggcccgcggcgtggcgtccctgctggccgccagcgctggcgatgccgcaagcgcc
tctcaggagagcttccgcttccagggcgccgacatgtccaccaagctcaagctgctgggc
gtggatgtcggctccatcggtgacgcacacggcaaaaccgagggcgcgatcagctatcgc
tactgtgacgaggccgacggcgtctatcgccgcctgatcgtctcgcgggaccgcaagcag
gtgctgggcgcggtactgatcggcgacaactcgcgctacgacaccctgctgcagtacgtc
accaacggcatcacggcacccaaggacccggcggcactcatcctgccggatgccagtggc
gaagccatcacgctgggcgcggatgccctgcccgacagcgccacgctgtgctcctgccac
aacgtctccaagggcgatgtctgcagcgccatcgatgccggcaacagtgatctgggcgcc
atcaaggcctgcaccaaggccagcaccggctgcggaggctgtgcggcgctgctcaagaag
gtagtggatgccgagctggaaagtcgtggcgtcgaggtcgaccgctcactgtgcgagcac
ttcgcgcacacgcgtcaggagctctactcgctggtgcgcgtcgaaggcatcgagaccttc
gccgagctgatggccagccacggccgccatccggatgccctgggctgtgagatctgcaag
ccggcggtgggctcgattctggcctcgtgctggaacgcgccgatcaccgagtcctcgcac
attccgctgcaggacaccaatgacaccttcatggccaacatgcagaagaacggtacctat
tccgtggtgccgcgcatccccggcggcgaaatcacgccggacaagctgatcgccatcggt
gagatcggcaagcgctacaacctctataccaagatcaccggcggccagcgcatcgacctc
ttcggtgcccagctacatgaactgccggacatctggagcgagctgatcgccgccggcttc
gagaccggtcacgcctatggcaagtccacccgcacggtgaaatcctgcatcggcagcacc
tggtgtcgctatggcgtgcaggacagcatggcgatggcgctgacgctggaagaccgttac
aagggcctgcgttccccgcacaagctcaagttcgccgtctccggctgcacccgtgaatgc
gccgaggcccagagcaaggatgtcggcgtgatcgccaccgagaacggctggaacctctac
gtctgcggcaacggcggcatgcgcccgcgtcatgccgagctgttcgcgaccgacctggat
gacgagagcctgatccgcaccatcgaccgcttcctgatgttctacatccgcaccgccgac
cgcctgcagcgcacctccgtctggcgcgagggcctcgaaggcggcctcgactatctgaaa
gaggtgattctcgaggacagtctggggctcggcgagaccctcgaagagcagatgcagcag
gtggtggaccgctatgaatgcgaatgggccaatgcgctcaagagccccgagaaactcaag
cgcttccgcagctacgtgaatgaccagcgcccggaccctgacgtggtcaatatcgtcgag
cgcgaccagattcgccccgccagccgcgatgaactggccagtggcaatctgatcatcagc
gacggtggcgcccgcgaagcagtggcagaacatcaacctcagtcaacgacccacctggcc
acggaggtacgctcatga
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