Cobetia sp. AM6: CLAM6_31130
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Entry
CLAM6_31130 CDS
T08724
Name
(GenBank) penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00550
Peptidoglycan biosynthesis
cobe01100
Metabolic pathways
cobe01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLAM6_31130
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CLAM6_31130
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cobe01003
]
CLAM6_31130
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cobe01011
]
CLAM6_31130
Enzymes [BR:
cobe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CLAM6_31130
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CLAM6_31130
Glycosyltransferases [BR:
cobe01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CLAM6_31130
Peptidoglycan biosynthesis and degradation proteins [BR:
cobe01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CLAM6_31130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BBO57802
UniProt:
A0A5K7YDN1
LinkDB
All DBs
Position
3766925..3769411
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AA seq
828 aa
AA seq
DB search
MFWLLLSLCAAGLLAIVGASLYFSPGLPDVHQLQDTKLQTPLRIYTRDGKLIGEYGDQRR
IPVTYDEIPETFVDALLAAEDSNFFSHPGIDPKGLARAAVQLASSGSIQSGGSTITMQVA
RNYLLTLDQTFTRKIREILLSLQMEEILSKQEIMELYVNKIFLGHRAYGIAAAARTYYDK
SLDELTLAEQAMLAGLPKAPSSFNPLTNPQRALIRRNWILLRMKELGYIEPQAYDEAVKA
PITAARHYSRPEVQAPYVAEMARSFAVDRFGDKAYTDNVRITTTLDSSLQPMARDALIKG
LIAYDTRHGWRGVEESDIAASLAEAQDQTDQAGLEEELSKSPEVLETAKQAAQKSEKRIA
GIDRDVSNWLKVLDRTPDYGPLKAAIVVESTGKQMKALLADATVVTLDWDGLKWAREYKS
AKWRGGVPGSAAEIAKAGDLVRVIKQDDGYRLGQLPDAQSAIVSLDPESGAILALQGGFS
YSASKFNRAIQARRQAGSIFKPFVYLSGLEQAGMSPATIINNAPVVLQDGGKVWRPENAG
GKFTGPTRIRVGLYRSLNLVSVRLLQTVGLDKTLDFLVKLGFQRDELPNGLSLALGSASL
TPLEMARGYAVLSNGGFRVEPWYIDTITRGDDETDYEAHPPVACANCAPGMVTVNRDGRQ
YPLAERVASPEAMYLIRDMMQDVIKRGTGRGALALGRDDLAGKTGTTNDQRDAWFSGFNS
KLVATVWVGKDSNDTLAEYGAQAALPIWVDYMRGALKGMPSSTMERPENIVTATIDPDSG
KRLRSGQSGGISELFRKDNLPPYKERTIRKELEQESGSEGTGTFEAIF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
gtgttctggctgctgctatcactatgtgccgcgggacttctggccatcgttggcgcttcg
ctgtacttctcgccgggcctgcccgacgtccatcagcttcaggataccaagctgcagacg
ccgctgcgcatctatacccgcgatggcaagctgatcggcgaatacggtgaccagcgccgc
atcccggtcacctacgacgagatccccgagaccttcgtcgacgccctcctcgccgccgag
gacagcaacttcttctcccacccgggcatcgaccccaaggggctggcgcgcgcggccgtg
cagctggcctccagcggcagcatccagtccggtggcagcaccatcaccatgcaggtggcg
cgcaactatctgctgacgctggaccagaccttcacgcgcaagattcgcgagattctgctg
tcgctgcagatggaagagatcctctccaagcaggagatcatggagctctacgtcaacaag
atcttcctaggccatcgcgcctacgggatcgccgccgctgcgcgcacctactacgacaag
tccctggatgagctgaccctggccgagcaggccatgctggccggcctgcccaaggcgccg
tcaagcttcaacccgctgaccaacccgcagcgcgcactgatccgtcgcaactggatcctg
ctgcgcatgaaggagctgggttacatcgagccgcaggcctatgacgaagccgtcaaggca
ccgatcaccgcggcacgccactactcccggccggaagtgcaggcaccctacgtcgcggaa
atggcacgcagcttcgccgtcgaccgcttcggcgacaaggcctacaccgacaacgtccgc
atcaccacgacgctggacagctcgctgcagccaatggcacgtgatgcgctgatcaagggg
ctgatcgcctacgatacccgccacggttggcgcggggtcgaggaatccgacatcgccgcc
tccctggcggaagcccaggaccagaccgatcaggccggcctcgaggaagaactctccaag
tcaccggaagtgctggaaaccgccaagcaggcggcccagaagagcgagaagcgcatcgcc
ggcatcgaccgtgatgtctcgaactggctgaaagtgctcgaccgcaccccggattacggc
ccactgaaggccgccatcgtggtcgaaagcaccggcaagcagatgaaggcactgctggcc
gacgccacggtcgtgaccctcgattgggacggcctgaagtgggcgcgtgagtacaagagc
gccaaatggcgtggtggcgtgccggggtcggccgccgagatcgccaaggccggtgatctg
gtacgcgtgatcaagcaggacgacggctaccgcctgggccagctgccggacgcgcaatcc
gccatcgtctcgctggacccggaaagtggcgccatcctcgccctgcaaggtggcttcagc
tattccgccagcaagttcaaccgcgccatccaggcacgccgtcaggcaggctcgatcttc
aagccgttcgtctatctgtccgggctcgaacaggccggcatgtcaccggcgaccatcatc
aacaacgcccccgtcgtgcttcaggatggcggcaaggtgtggcgtccggaaaatgccggc
ggcaagttcaccggcccgacccgtatccgcgttggcctgtatcgctcgctgaacctggtc
tccgtgcgtctgctgcagacggtcggcctcgacaagaccctcgacttcctggtcaagctg
ggcttccagcgtgacgagctgcccaatggcctgtcactggccctgggcagcgcctcgctg
accccgctggagatggcacgcggctatgccgtgctctccaatggcggcttccgtgtcgag
ccctggtacatcgataccatcacgcgtggcgatgacgagaccgactatgaagcgcatccg
ccggttgcctgcgccaactgtgcgccgggtatggtcaccgtcaatcgtgacggtcgccag
tacccgctggccgagcgtgtcgcctcccctgaagccatgtatctgatccgtgacatgatg
caggatgtcatcaagcgcggtactggccgtggcgccctggcgctgggtcgtgatgacctg
gccggcaagaccggcaccaccaacgaccagcgtgatgcctggttctccggcttcaacagc
aagctggtggccacggtctgggtcggcaaggactccaacgacaccctggccgagtatggc
gcccaggccgccctgcccatctgggtcgactacatgcgcggcgccctcaagggcatgccg
tcctccaccatggagcgtccggaaaacatcgtgacggcgaccatcgacccggactctggc
aagcgcctgcgcagcggtcagtccggcggcatcagtgagctgttccgcaaggataatctg
ccgccctacaaggaacgcaccatccgcaaggagctggagcaggaaagcggctcggaaggt
accggaactttcgaggccatcttctga
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