Cobetia sp. AM6: CLAM6_32030
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Entry
CLAM6_32030 CDS
T08724
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CLAM6_32030 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cobe01007
]
CLAM6_32030 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cobe03016
]
CLAM6_32030 (lysS)
Enzymes [BR:
cobe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CLAM6_32030 (lysS)
Amino acid related enzymes [BR:
cobe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CLAM6_32030 (lysS)
Transfer RNA biogenesis [BR:
cobe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CLAM6_32030 (lysS)
Prokaryotic type
Other AARSs
CLAM6_32030 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AsnA
Motif
Other DBs
NCBI-ProteinID:
BBO57892
LinkDB
All DBs
Position
complement(3870384..3871922)
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AA seq
512 aa
AA seq
DB search
MSTEQTPAIDEQQAAEQAQEENRLIAERRAKLNARREQAAAEGKSAFPNDFRRDSLAADL
MEELGEKDKAELETLDRKAAVAGRIMRKRGPFIVLQEVSGQIQLYVDKKGLPEALLEDIK
SWDIGDIVGASGPVHKSGKGDLYVMIESAQLMTKNLRPLPDKFHGLSDQEMRYRQRYVDL
IMNEQSRRTFALRAGIVASIRRFLSDRGFMEVETPMLQQIPGGATARPFITHHNALDMEM
YLRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNPEFTMLEFYWAYADYRDLIALT
EDMIRTAAQEVLGTTQITCQGSEYDLSQPFIQMTMRESIIKYGDGITEADLADYAAARAT
AERLGIQVKPIWGLGKLETEIFEEVAEHRLDQPTFITEYPAEVSPLARRNDANPHVTDRF
EFFVGGREIANGFSELNDAEDQAERFQAQVAEKDAGDDEAMFYDADYVRALEYGMPPTAG
EGIGIDRLVMLLTDSASIRDVLLFPAMRPQQG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagagcagacccccgccattgatgagcagcaggccgccgaacaggctcaggaa
gagaaccgcctgatcgccgaacgtcgcgccaagctgaacgcccgccgcgagcaggccgcc
gccgaaggcaagagtgccttcccgaatgatttccgtcgtgacagcctcgccgctgacctg
atggaagagctgggcgagaaggacaaggccgagctggagacgctggaccgcaaggccgcc
gtcgccgggcgtatcatgcgcaaacgtggccccttcatcgttctgcaggaagtctccggt
cagattcagctctacgtcgacaagaagggcctgccggaagcgctgctcgaggacatcaag
agctgggatatcggtgacatcgtcggtgccagtggtccggtgcacaaatccggcaagggc
gatctgtacgtcatgatcgaaagcgcccagctgatgaccaagaacctgcgtccgctgccg
gacaagttccacggtctgtccgatcaggaaatgcgctatcgccagcgttatgtcgacctg
atcatgaacgagcagtcacgccgcaccttcgcgctgcgtgccggcatcgtcgcctccatc
cgtcgcttcctcagcgatcgcggcttcatggaagtcgagacgccgatgctgcagcagatt
ccgggtggcgcgaccgcgcgtccgttcatcacgcaccacaatgcgctggacatggaaatg
tacctgcgcatcgcgccggagctgtacctcaagcgtctggtggtgggtggcttcgagcgc
gtgttcgagatcaaccgcaacttccgcaacgaagggctgtcgacgcgtcacaaccccgag
ttcaccatgctcgagttctactgggcctacgcggactaccgtgacctgatcgcgctcacc
gaagacatgatccgcaccgcggcccaggaagtgctcggcaccacgcagatcacctgccag
ggcagcgagtacgacctgagccagccgttcatccagatgaccatgcgtgagtcgatcatc
aagtacggcgatggcatcaccgaagccgacctggccgattacgccgccgcgcgcgccacg
gccgagcgtctcggcatccaggtcaagccgatctggggtctgggcaagctcgagaccgag
atcttcgaggaagtcgccgagcaccgtctcgaccagccgaccttcatcaccgaatatccg
gccgaggtcagcccgctggcgcgtcgcaacgatgccaacccgcacgtgaccgatcgcttc
gagttcttcgtcggtggccgcgagatcgccaatggcttctcggagctcaacgacgctgaa
gaccaggccgaacgcttccaggcccaggtggccgagaaggacgctggtgatgacgaagcc
atgttctacgacgccgactacgtgcgcgcgctggaatacggcatgccgccgaccgccggt
gaaggcatcggcatcgaccgtctggtgatgctgctgaccgacagcgcctccatccgcgac
gtgctgctgttcccggcgatgcgtccgcagcagggctga
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