Cobetia sp. AM6: CLAM6_32050
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Entry
CLAM6_32050 CDS
T08724
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
cobe
Cobetia sp. AM6
Pathway
cobe01501
beta-Lactam resistance
cobe02010
ABC transporters
cobe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLAM6_32050
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLAM6_32050
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CLAM6_32050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobe02000
]
CLAM6_32050
Transporters [BR:
cobe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CLAM6_32050
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Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Laminin_B
VGCC_beta4Aa_N
Motif
Other DBs
NCBI-ProteinID:
BBO57894
LinkDB
All DBs
Position
3873604..3875229
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AA seq
541 aa
AA seq
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MARLYSPSHTPALPGRFALKRLAGSLLLAGGIVASQGIMADTLKLAIMGEPASLDPQQIS
GTWENDVVGDLFEGLVTEAADGERIPGAAESWQISDDGKTYTFTLREDGKWSDGEPVTAE
DFVYALKRIMTPENASDYAYILYPIKNAKAINSGEAEPDTLGVRAVDDHTLEITLERPTP
YFLDQLSHYTAYPLPKHVVEKYGKDWTDPGKMVSNGAFELSEWQPQTRIVALKNPEFHDA
NEVALDEVIYYPIEERNSALKRFRAGEIDIAREFPTQQYGWLKDNLPDATHVAPYLGIYY
YVLNSRDGHATADPRVREALNLSIRRNIITDKILGTGEVPAYSFVPTGVNHYDIQEMAFK
DMSMDERMQKARSLMEEAGYGPDNPLELTLRYNTSEDHKKVAIAAAAMWKPLGVKVNLLN
AEVAVHYEDMRQGKFDVGRAGWIGDYNDAQNFLNLLESGVPNNYGAYSNSALDDDMQEAA
NTLDMEDREALMQDAERKALDDYAVLPIYYYVSRNLVNPKLSGWKNNIEDTHRSRWVSFS
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcacgactgtactccccctctcacaccccggcgctccccggacgcttcgcgctcaaa
cgcctggcaggttctctgctgctggccgggggcatcgttgcctcccagggcatcatggcc
gacacgctcaagctggcgatcatgggtgaaccggcctcgctggacccgcagcagatctcc
ggtacctgggaaaatgacgtggtgggcgacctcttcgagggcctggtcaccgaagccgcc
gatggcgagcgcatccccggcgcggccgagtcgtggcagatttccgacgatggcaagacc
tataccttcacgctgcgcgaggacggcaagtggtcagacggtgagccggtgaccgccgag
gacttcgtgtacgcgctcaagcgcatcatgacgccggaaaatgcctcggattacgcctac
atcctgtatccgatcaagaatgccaaggccatcaacagcggcgaggccgagccggacacc
ctcggcgtgcgtgccgtggatgatcacaccctcgagatcactctcgagcgcccgaccccc
tacttcctggatcagctgtcgcactacaccgcctacccgctgcccaaacatgtggtggag
aagtacggcaaggactggaccgaccccggcaagatggtctccaacggtgccttcgagctg
agcgagtggcagccacagacccgcatcgtcgcgctcaagaatcctgagttccacgatgcc
aatgaggtcgcgctggatgaggtgatctactaccccatcgaggagcgcaacagcgccctg
aagcgcttccgcgccggcgagatcgacatcgcgcgcgaattcccgacccagcaatacggc
tggctgaaggacaacctgccggacgccacccacgtcgcgccctacctgggcatctactac
tacgtgctcaactcgcgcgatggccatgccacggcagacccgcgcgtgcgcgaggcgctc
aacctctccatccgccgcaacatcatcaccgacaagattctcggcaccggcgaagtgccg
gcctacagcttcgtgcccaccggcgtgaaccattacgacatccaggagatggccttcaag
gacatgtcgatggatgagcgcatgcagaaggcccggtccctgatggaagaggctggctac
ggcccggacaacccgctggagctgaccctgcgctacaacaccagcgaagaccacaagaag
gtggccatcgccgccgccgcgatgtggaagccgctgggcgtgaaggtcaatctgctgaat
gccgaagtcgcggtgcactacgaggacatgcgccagggcaagttcgatgtcggccgcgcc
ggctggataggcgactacaacgacgcccagaacttcctcaacctgctggaaagcggcgtg
cccaacaactacggcgcctattccaacagtgcgctggatgacgacatgcaagaggccgcc
aatacgctcgacatggaggatcgcgaggcactgatgcaggacgccgagcgcaaggcgctg
gatgactacgccgtgctgccgatctactactacgtgtcgcgcaatctggtgaaccccaag
ctcagcggctggaagaacaacatcgaggatacccaccgctcgcgctgggtctcgttctcc
gagtga
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