Cobetia sp. AM6: CLAM6_32060
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Entry
CLAM6_32060 CDS
T08724
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
cobe
Cobetia sp. AM6
Pathway
cobe01501
beta-Lactam resistance
cobe02010
ABC transporters
cobe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLAM6_32060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLAM6_32060
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CLAM6_32060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobe02000
]
CLAM6_32060
Transporters [BR:
cobe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CLAM6_32060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF1843
Motif
Other DBs
NCBI-ProteinID:
BBO57895
UniProt:
A0A5K7YJC1
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All DBs
Position
3875380..3877017
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AA seq
545 aa
AA seq
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MSPTSPMQCAASLSAGLLLSVLPLSLGASGSAVAAESTSQSEQILRIANGSEPASLDPQQ
TNGTWETRITRDLFEPLIAYSADGELIPGLAERWESSADGLSWTFHLREGLEWSDGTPLT
AEDAVFALRRLLTPATAAHNATLYYPIVNARAVNTGELPAEKLGVAAPDAQTLTISLSHP
SATLEQTLAMSEAAPLPRHVIAAKGADWTRPANMATSGAFVLKTWSPQAEIRLTPNPRYH
AADTVALDEVVYLPIEESHAALNRFRAGEVEIAYGVPASHYTWIQDNLAAALQTYPILGE
YFYVFNLREGSPVADQRIRRALNLATRREVITERILGMGQIPSWHFVPKALGEHQGARFD
FADWSMDRRMAKARELMADAGYGPDTPLELTLRYNTLEDHKKIAVALGAMWKPLGVKVTL
TNTEAAVHYRDLALGDFEVGRYGMIATIADAYDFLNAFSSDNTSNAPGLSSPTYDALIEA
AAREGDVGTRQRQLHDAEQYLLDHDVVLPLYDYVTSSLVDPAISGWAPNALDVHPSRYLQ
LDTSH
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccacctcaccgatgcaatgcgcggcaagcctcagcgcaggcctgctgctgtcc
gttcttcccctctcccttggcgcttccggcagcgccgtggcagcagaatccaccagccag
agcgagcagatcctgcgcatcgccaatggctccgaaccggcgtcacttgacccgcaacag
accaacggcacctgggagacacgtatcacgcgtgatctgttcgagccgctgatcgcctac
tccgccgatggcgagctgattcccgggctggcggagcgctgggagtcgtccgccgatggg
ctgagctggacctttcatctgcgcgaggggctcgaatggtcagacggcacgccgctgacc
gccgaggatgccgtcttcgcgctgcgccgcctgctgacacccgccaccgcggcccacaac
gccacgctctactacccgatcgtcaatgcccgcgcggtgaataccggtgagctgcccgcg
gagaagcttggcgtggccgcgccggatgcgcagacgctcaccatcagcctcagccaccct
tcggcgacgctggagcagacgctggcgatgagcgaagccgccccgctgccacgccatgtg
atcgcggccaagggcgctgactggacgcggccggccaacatggccacctcgggcgccttc
gtgctcaagacctggtcgccccaggccgagattcgcctgacgcccaatccgcgctatcac
gcggcggacacggtcgcgctcgatgaggtggtctacctgcccatcgaggagagtcatgcc
gcgctcaatcgcttccgcgccggcgaagtcgagatcgcctacggcgtacccgccagccat
tacacctggattcaggacaacctggccgctgcccttcagacctacccgatcctcggcgag
tacttctatgtcttcaatctgcgcgagggctcgccggtggccgaccagcgcattcgtcgc
gcgctgaatctggccacgcgccgtgaggtgatcaccgagcgcattctcggcatgggccag
attccctcctggcacttcgtgccgaaggcattgggtgagcatcagggcgcgcgcttcgac
ttcgctgactggtcgatggaccggcgcatggcgaaggcgcgtgagctgatggccgacgcg
ggctacggcccggataccccgcttgagctgaccctgcgctataacaccctggaagatcac
aagaagatcgccgtggccctgggggcgatgtggaaaccgctgggcgtgaaggtgacgctg
accaacaccgaggccgcggtgcattaccgcgatctggcgctgggcgatttcgaggtcggc
cgttacggcatgatcgcgaccatcgccgatgcctacgacttcctgaacgccttcagcagc
gacaacacctccaacgcgcccgggctcagctcgccgacctacgatgcgctgatcgaggcg
gcggcgcgtgaaggagacgtcggcacccgccagcgccagctccacgacgccgagcagtat
ctgctcgaccacgatgtggtgctgccgctctacgactatgtcacctccagcctggtcgac
cccgccatcagcggctgggcgcccaatgcgctggacgtgcacccgagtcgctatctgcag
ctcgatacctcgcactga
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