Cobetia sp. AM6: CLAM6_32090
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Entry
CLAM6_32090 CDS
T08724
Symbol
oppD
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
cobe
Cobetia sp. AM6
Pathway
cobe01501
beta-Lactam resistance
cobe02010
ABC transporters
cobe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLAM6_32090 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLAM6_32090 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CLAM6_32090 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobe02000
]
CLAM6_32090 (oppD)
Transporters [BR:
cobe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CLAM6_32090 (oppD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_22
AAA_29
AAA_16
nSTAND3
nSTAND1
DUF87
ATP-synt_ab
NB-ARC
Mg_chelatase
NACHT
RsgA_GTPase
APS_kinase
AAA_18
PRK
MMR_HSR1
MobB
AAA_23
NTPase_1
MeaB
Motif
Other DBs
NCBI-ProteinID:
BBO57898
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All DBs
Position
3878957..3880684
Genome browser
AA seq
575 aa
AA seq
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MTSSPSTSGTSSSLPPARNAADQARADTLTRLGLAAEAPGTPPLMEIDDLKVDFQLPDGA
VPAVKGVSFTLNKGETLALVGESGSGKSVTSTAILRLLPELAEIKGAIRLRGEDLLSAST
RRMRELRGNRIATVFQEPMTSLNPLHRIGRQIIEVLALHRDLKGRAARHKALELLEQVGI
PEPARRIDSYPHELSGGQRQRVMIAIALACEPDLLIADEPTTALDVTVQAQILRLLKSLQ
QRYGMAILFITHDLSIVRHFADRVCVMRHGELLETGATHDVFESPQHAYTRMLIDAEPAG
EKAPVAADAPVLLSARDVRVSFTIKRPLFGPKVAFEAVRGIDLEVRRGQTIGIVGESGSG
KSTLGRALLRLLKSQGQISFDGVDIMPLDKSGMRPLRSRMQVVFQDPFGSLSPRLTVGEI
ISEGLRVHHPELNRAQRDARVCDALSEVSLDPGMRNRYPHEFSGGQRQRIAIARALVLKP
EFLLLDEPTSALDRSVQVTVIDLLRDLQARHGLTYLFISHDLAVVRALSDHLIVMKEGEV
VESGSTHAIFEAPRERYTCELMQAAFAPDLGQTHH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttcaccctctacctccggcacctcctccagcctgccgccagcacgcaacgcc
gccgaccaggcccgcgccgacaccctgactcgcctgggactggcggccgaggcgcctggc
acgccgccgctgatggagatcgatgacctcaaggtcgacttccagctgccggatggcgcg
gtacccgccgtcaagggcgtcagcttcactctcaacaagggcgagacgctggcgctggtc
ggcgagtccggctccggcaagtcagtcacatccaccgccatcctgcgcctgctgccggaa
ctcgccgagatcaagggtgccatccgcctgcgcggcgaagacctgctgagcgcctcgacg
cggcgcatgcgcgagctgcgcggcaatcgcatcgccaccgtcttccaggagccgatgacc
tcgctcaacccgctgcaccgcatcgggcgccagatcatcgaggtactggcactgcatcgt
gacctcaagggccgcgcggcccgccacaaggcgctggaactgctcgagcaggtcggcatt
ccggagccggcgcgacgcatcgacagctatccccacgagctgtccggtggccagcgtcag
cgcgtgatgatcgccatcgcactggcctgcgagccggacctgctgatcgccgatgagccg
accaccgcgctggatgtcacggtgcaggcgcagatcctgcggctgctcaagtcgctgcaa
cagcgctacggcatggcgatcctgttcatcacccacgacctgagcatcgtgcgccacttc
gcggaccgcgtctgcgtgatgcgtcacggcgagctgctggaaaccggcgccacccacgac
gtcttcgagagcccgcagcacgcctacacccgcatgctgatcgatgccgaaccggccggt
gagaaggcgccggtggccgcggatgcaccggtgctgctgtcggcgcgcgatgtgcgtgtc
agtttcaccatcaagcgtccgctgttcgggcccaaggtcgccttcgaggcggtgcgcggc
atcgatctcgaggtgcgacgcggccagaccatcggcatcgtcggcgagtccggctccggc
aagtcgacgctgggtcgcgccctgctgcgcctgctcaagagccagggccagatcagcttc
gatggcgtcgatatcatgccgctggacaagtcgggcatgcgccccttgcgctcgcgcatg
caggtcgtcttccaggaccccttcggctccctgtcgccgcgcctgaccgtgggcgagatc
atcagcgaaggcctgcgcgtgcatcaccccgagctcaatcgcgcccagcgcgatgcgcgg
gtctgcgacgccctgagcgaggtcagcctcgaccccggcatgcgcaatcgctatccgcat
gaattctccggtggtcagcgccagcgcatcgccatagcccgcgccctggtgctcaagccg
gaattcctgctgctggacgagccgacctcggcgctggaccgctcggtacaggtcacggtg
atcgacctgctgcgcgacctgcaggcgcgccatggcctgacctatctgttcatcagccat
gacctggcggtcgtgcgtgcgctgtcagaccatctcatcgtgatgaaggaaggcgaggtg
gtggaaagcggcagcacccacgccatcttcgaggcaccccgtgagcgttatacgtgtgaa
ttgatgcaggctgccttcgccccggacctgggacagacgcaccactga
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