Cobetia sp. AM6: CLAM6_32190
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Entry
CLAM6_32190 CDS
T08724
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobe03036
]
CLAM6_32190 (xerD)
Chromosome and associated proteins [BR:
cobe03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CLAM6_32190 (xerD)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_M
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
BBO57908
UniProt:
A0A5K7Y9Y4
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Position
complement(3899303..3900211)
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AA seq
302 aa
AA seq
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MMDDDALVEAFLDTLWLERGASDNTLGAYRGDLTAWRRWLADQAETGADTVPLLSVAPQQ
VQAFCDSRRESHALRSTARMLSALRRFYRWALAEGMIEADPLHEVRLPRVIPSLPGTLDE
EEVERLLEAPDLDTPIGLRDRTMLEVLYGAGLRISELVNLSVDALNLRQGVVRVTGKGDR
ERLVPLGEEACDWLSRWLSVGRPAMMADQTRPALFPGRHDKAMTRQTFWHRIRRHAVTAA
ISKPLSPHTLRHAFATHLLNHGANLRVVQLLLGHRDLSTTQIYTHVAQARLERLHAEHHP
RG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgatgcgttggtcgaggcctttctcgatacgttgtggctagagcgcggt
gccagtgacaatacgctcggcgcctatcgcggtgatctcacggcctggcggcgctggttg
gccgatcaggcggagacgggcgctgacacggtgcccttgctgagcgtggcaccgcagcag
gtgcaggccttctgtgactctcggcgtgagtcgcatgcgctgcgctccacggcgcgtatg
ctgtcggcattgcggcgcttctatcgctgggcgctggccgaaggcatgatcgaggcggac
ccgctgcatgaggtgcgcctgccgcgcgtgattcccagcctgccgggcacgctggatgag
gaagaggtcgagcgcctgctggaggcaccggatctcgacacgcccatcgggctgcgcgac
cgcaccatgctcgaagtgctctatggcgcggggttgcgtatcagcgagctggtcaacctg
agtgtcgatgcgctcaatctgcgccagggtgtcgtgcgtgtcaccggcaagggcgatcgt
gagcggctggtgccgctgggcgaggaggcctgtgactggttgtcacgctggctgtccgtt
ggccgacctgcgatgatggccgaccagacgcgtccggcactgtttcccggccgacacgac
aaggccatgacgcgacagaccttctggcatcgtatccggcgtcacgccgtgactgcggcc
atcagcaagcctctgtcaccgcatacgctgcgccatgccttcgccacgcacctgctcaat
cacggtgccaacctgcgtgtcgtgcagctgttgctgggacatcgtgatctttccacgacc
cagatctatacccatgtggcccaggcgcgtctggagcgtctgcatgccgaacatcatccg
cgtggctga
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