Cobetia sp. AM6: CLAM6_32710
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Entry
CLAM6_32710 CDS
T08724
Symbol
rluD
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobe03009
]
CLAM6_32710 (rluD)
Enzymes [BR:
cobe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CLAM6_32710 (rluD)
Ribosome biogenesis [BR:
cobe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLAM6_32710 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BBO57960
LinkDB
All DBs
Position
complement(3962200..3963153)
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AA seq
317 aa
AA seq
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MADTINREERIPEAMIGMRLDQACAEIFSDYSRERLKHWIKTGALTLDGAAVKPREKVYG
GERLALTAELEEEVSHEPEDIELEIVYEDDDVLVINKEHGMVVHPGAGNHDGTLLNAILH
HCPGNSMMPRAGIVHRLDKDTSGLMVVAKSLTAQADLVEQLQARTVSREYDAVVTGVLTS
GATVDAPIGRHPKDRKRQAVTHSGKPAVTHFRVVERFRGHTHIRCKLETGRTHQIRVHMA
HQRYPLVGDPVYGGRLKLPPGASDPLKELLRQFPRQALHARRLAFIHPITGKEVEFRAEM
PGDMLVLIDYLKEDIAR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaccatcaaccgcgaagagcggatcccggaggcgatgattggcatgcgcctt
gaccaggcctgcgccgagatcttctccgactattcccgcgagcgtctcaagcactggatc
aagaccggtgcgctgaccctcgacggtgccgccgtcaaaccccgcgagaaggtctatggc
ggtgaacgtctggccctgaccgccgagcttgaagaggaagtcagccacgagccggaagat
atcgagctcgagatcgtctatgaagacgacgacgtgctggtcatcaacaaggagcacggc
atggtcgtgcacccgggcgcgggtaaccacgatggcacgctgctcaacgccatcctgcat
cattgtccgggcaattccatgatgccgcgtgccggtatcgtgcaccgtctcgacaaggac
accagcggactgatggtggtggccaagtcattgaccgcccaggcggacctggtcgagcag
ctgcaggcccgtaccgtatcgcgcgagtacgatgccgtcgtcacgggcgtgctgacctcc
ggtgccaccgtggatgcgcccatcgggcgtcaccccaaggaccgcaagcgtcaggccgtc
actcacagtggcaagccggcggtcacccacttccgcgtggtggaacgtttccggggtcac
acccatatccgctgcaagctggaaaccgggcgtacccaccagattcgcgtgcacatggcg
caccagcgctatccgctggtcggagacccggtctacggcgggcgtctgaagctgccgccg
ggggccagcgacccgctcaaggagctgctgcgtcagttcccgcgtcaggcactgcatgcc
cgtcgtctcgccttcatccacccgatcacgggcaaggaagtcgaattccgcgccgagatg
ccgggcgacatgctggtgttgatcgactatctcaaggaagacatcgctcgctga
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