Cobetia sp. AM6: CLAM6_32770
Help
Entry
CLAM6_32770 CDS
T08724
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cobe02044
]
CLAM6_32770
02035 Bacterial motility proteins [BR:
cobe02035
]
CLAM6_32770
Secretion system [BR:
cobe02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CLAM6_32770
Bacterial motility proteins [BR:
cobe02035
]
Pilus system
Pilus assembly proteins
CLAM6_32770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ_3
PQQ
Motif
Other DBs
NCBI-ProteinID:
BBO57966
UniProt:
A0A5K7Y649
LinkDB
All DBs
Position
complement(3968249..3970423)
Genome browser
AA seq
724 aa
AA seq
DB search
MTTYTVAFGVDSDSDEWSSNKRVTESSSSTIDDLEQAAIDGGGSYFNASSPTDLVSALAA
IASEIVAVGNSVSGLSTNLTTASVETDSQLIESRYSASTWTGDVVASSVQEGKDVEDDDQ
VWSAATQLSEALEEKDGVESRTVFTMSGGNGVEFTTDNAGRLSSSQRNDLARMEVGGNST
DDHVEAAIEWLRGSDEYEGDGLRNRTGVQLGDIIGSSPVVVTRDDSTTEGSVFVGANDGM
LHAFDLKTGNEQFAYIPELLYSEEDDAGLGYLTDPGYQHRYYVDGELRLASLNGEEWLVS
GLAGGGRGLFALNVTKVVAGEDFDEDDVVRWEFGASDDDDMGHVYGSAHIVTLNNGDSAV
LVGNGLETTDENAAPTLFALELDGVNAGGVIAKLSPSGVTGGLANLQVADLDSNGTVDFA
YGGDLQGRLWKFDLSDDDSSKWSVTRLFTACATSLTGGECQTDALQPITVKPTLSRYSGE
THTMTSPNLLVSFGTGQDMYADAEDEAWVTQSLYTVLDTGGSHTSLTRSDLEARNFVSGS
YTNGELTGRTLGGDSFAYYPSQLEDQDTDRFGWYLDLDASEQEELVEPANLLSNLVVFST
STSSTGTNFCESTGGGWLVALDTETGLPTYDDSEGSYVTIFDFNQDEAFSADDLVGTLVD
DTVAVGNVIVSVKLSGTPTSSVSVGDTVYVGTSSLGSEEGGVSSYDLNVSSSTDTGRVSW
YQLR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtataccgtcgctttcggtgtggactccgacagtgatgagtggagcagcaat
aagcgtgtcaccgaaagcagctccagcaccatcgatgacctggagcaggcggccatcgat
ggcggtggctcctacttcaatgcctccagcccgacggacctcgtctcggccctggcggcg
atcgcctccgagatcgtcgcggtgggcaacagtgtcagcggcctctccaccaacctgacc
acggccagtgtcgagacggatagccagctgatcgagagccgctattccgcctcgacctgg
acgggcgatgtggtggcctcgtcggtacaggagggcaaggacgtcgaggatgacgaccag
gtctggagtgctgccacccagttgagtgaggcattggaagagaaggatggtgttgagtcg
cgtacggtcttcaccatgtccggcggcaacggagtcgagttcacgaccgacaacgcgggc
cgtctgagctccagccagcgcaatgatctcgcgcgcatggaggtcggtggcaactccacc
gatgaccatgtggaggcagcgatcgaatggttgcggggcagcgatgaatacgaaggcgat
ggtctgcgcaatcgcactggcgtccaactgggcgacatcatcggctcgtcgcctgtcgtc
gtgacacgtgacgactcgacgacagagggcagtgtcttcgtcggggccaacgacggcatg
ctgcatgccttcgacctcaagaccggcaacgagcagttcgcctatattccggaactgctc
tacagcgaagaggacgacgcagggctggggtatctgacggacccgggctatcagcatcgc
tactatgtcgacggtgagctgcgtctggccagcctgaatggtgaggagtggctggtatcc
ggtctcgccggtggtgggcgcggcctgttcgcgctcaatgtcaccaaggtcgtggcaggc
gaagacttcgacgaagatgatgtggtgcgctgggaattcggtgccagtgacgatgatgac
atggggcatgtctacggcagcgcgcatatcgtcactctcaacaacggcgacagcgcggtg
ctggtcggcaacggactggaaacgaccgatgagaacgctgcgccgacgttgttcgcgctg
gagcttgatggagtcaatgccggtggcgtgatcgccaagctgtcccccagcggagtgacc
ggcggattggcaaacctgcaggtcgcggacctcgacagcaatggcaccgtcgatttcgcc
tatggcggagacctgcaggggcggctgtggaagtttgacctcagtgacgacgacagcagc
aagtggagtgtcacgcgcctgttcacggcctgtgctaccagcctgaccggcggggagtgc
cagacggacgcgctgcagccgatcaccgtcaagccgacactcagtcgctactccggcgag
acgcacaccatgacctcgcccaatctgctggtgtccttcgggaccggccaggacatgtat
gccgacgctgaagatgaagcctgggtcacgcagagcctctacaccgtgctggataccggc
ggcagtcataccagtctgacacgcagtgaccttgaggcacgcaacttcgtcagcggaagc
tacaccaacggcgagctgacaggccggacccttggcggcgacagctttgcctactatccc
agccagctcgaggatcaagacacggatcgcttcggctggtatctggatctggacgcctcc
gagcaggaagagctggtcgagccggccaatctgctctccaacctggtggtcttctccacc
agcacgtccagtaccggaaccaacttctgtgaaagtaccggcggtggctggctggtcgcg
ctggacaccgagacaggcctgccgacctacgacgatagcgaaggcagctacgtgaccatc
ttcgatttcaatcaggatgaggccttcagcgctgatgacctggtcggcaccctcgttgat
gacaccgtcgccgtcggcaatgtcatcgtcagcgtcaaattgagcggtacaccgacgtcc
agtgtcagtgtcggcgatacggtctacgtgggcaccagttcgctgggcagcgaggagggc
ggtgtctcctcctatgatctcaacgtgtccagctcgacggacaccggccgtgtctcctgg
tatcagctgcgctga
DBGET
integrated database retrieval system
