Cobetia sp. AM6: CLAM6_33110
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Entry
CLAM6_33110 CDS
T08724
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobe03400
]
CLAM6_33110 (phr)
Enzymes [BR:
cobe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CLAM6_33110 (phr)
DNA repair and recombination proteins [BR:
cobe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CLAM6_33110 (phr)
Prokaryotic type
CLAM6_33110 (phr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBO58000
LinkDB
All DBs
Position
4005748..4007244
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AA seq
498 aa
AA seq
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MSSDSPSASSPASAPAGAPLQLVWLRSDLRVHDNTALSQAAARGPVVAVVAPCLAQWVEH
GHGANKLDFLRRGLHVLQQALAGYHIPLKVLDCDTFAEVPEALAALCDQLGAQALHFNDE
YAVNERERDRRVRERLAESDVRLHRYTDMLAFTPGELLTGKGDYYGVFTPFSKRWHKEVD
SRRLALNGAPEVQATPRDAQGRELHGDAIPPLPETLKGEPATALDAELWPAGEEAAQERL
ERFLTFRARRYHEQRDIPATRGTSELSPYLALGMISARQCYAAVLAENGSLADGDVGLTS
WVNELIWREFYQHILVGFPRVNRHRPFQRHTEALQWRDDDAGFAAWCEGRTGYPIVDAAM
RQLVQTGWMHNRLRMVTAMFLTKHLLIDWRRGEAFFMTHLVDGELGANNGGWQWAASTGT
DAAPYFRIFNPTTQGQRFDKDGEFIASMVPELAELPAKRRHQPSADDCQQTGYPRPIVDH
KAARQRALDTFKALSKSE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgactcaccatccgcctcttcccccgcctccgcgccagcgggggctcccctg
cagctggtctggctgcgcagtgacctgcgcgtacacgacaacaccgctctctcgcaggcc
gccgcacgcggcccggtcgtggccgtcgtcgccccctgcctggcgcagtgggtcgagcac
ggccacggcgccaacaagctcgacttcctgcgccgcggcctgcatgtcctgcaacaggca
ctcgccggctatcacatcccgctcaaggtgctcgactgcgacaccttcgctgaggtgccc
gaggcgctggccgcgctgtgcgatcagctgggtgcccaggccctgcacttcaatgacgaa
tatgccgtcaatgagcgtgagcgcgaccggcgcgtgcgcgagcgccttgccgaaagcgac
gtccgcctgcatcgctataccgacatgctggccttcacgcccggcgagctgctgaccggc
aagggcgattactacggcgtcttcacgcccttctccaagcgttggcacaaggaagtcgat
tcccgtcgtctggcgctgaatggggcacctgaagtgcaagccacgccccgcgacgcccag
gggcgcgagctccacggcgatgccatcccgccactgcccgagacgctcaagggcgagccg
gcgacagcgctggacgccgagctgtggccggccggcgaagaggccgcgcaggagcgcctg
gaacgcttcctgaccttccgcgcgcgccgctaccacgagcagcgcgatatccccgccacc
cgtggcaccagcgagctctcgccctatctggcgctgggcatgatctcggcccgccaatgc
tacgccgccgtactggcagagaacggcagcctcgccgatggcgatgtcggcctgaccagc
tgggtcaacgagctgatctggcgtgagttctaccagcacatcctggtcggcttcccgcgc
gtcaatcgccaccgtcccttccagcgtcataccgaggccctacagtggcgcgatgacgac
gcaggctttgccgcctggtgcgagggccgtaccggctaccccatcgtcgatgccgccatg
cgtcagctggtgcagaccggctggatgcacaatcggctgcgcatggtgacggcgatgttc
ctcaccaagcatctgctgatcgactggcgacgtggcgaggccttcttcatgacccatctc
gtcgatggtgagctgggcgccaacaatggtggctggcaatgggcggcttccaccggcacc
gatgccgcgccctatttccgcatcttcaatccgaccacccagggccagcgcttcgacaag
gacggcgagttcatcgcgagcatggtgccggagctggccgagctaccggccaagcggcgc
caccagcccagtgcggatgactgccaacagacgggctatccacgaccgatcgtcgaccac
aaggccgcccgccagcgggcgctggataccttcaaggcgctgtcaaaaagcgaatga
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