Cobetia sp. AM6: CLAM6_34030
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Entry
CLAM6_34030 CDS
T08724
Symbol
ntrC
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K07712
two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
cobe
Cobetia sp. AM6
Pathway
cobe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLAM6_34030 (ntrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cobe02022
]
CLAM6_34030 (ntrC)
Two-component system [BR:
cobe02022
]
NtrC family
GlnL-GlnG (nitrogen regulation)
CLAM6_34030 (ntrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
MCM
AAA
AAA_16
AAA_19
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBO58092
UniProt:
A0A5K7YEL8
LinkDB
All DBs
Position
complement(4114964..4116373)
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AA seq
469 aa
AA seq
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MSETARVCIVDDDRAIRWVLERALAQPDLEVETFERADQAEASIMRQCPDVLITDIRMPG
TDGLDLMARVREKYPDLPVIVMTAHSDLDSAVASYQGGAFEYLPKPFDVDEALALVRRAV
AHARESKAPAAVPEGLTKEIIGEAPAMQEVFRAIGRLSQSHITVLINGESGTGKERVAQA
LHQHSPRAAKPFIALNMAAIPKDLMESELFGHEKGAFTGATALRRGRFEQADGGTLFLDE
IGDMPAETQTRLLRVLADGEFYRVGGITPVKVDVRIIAATHQHLEKLVEDGRFREDLFHR
LNVIRVHLPRLSERREDIPRLMSHFLGEAARELSTEPKVLTEAAEKHLTRFDWPGNVRQL
ENTCRWLTVMASGREVMIEDLPPELRDASGTEAASGDWRGAFREWADRALAAGHTHLLEE
AVPDFERILIETALKHTGGRKGEAAELLGWGRNTLTRKLKVLLPALAED
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagactgcccgcgtctgtatcgtcgatgacgaccgtgccattcgctgggtgctg
gagcgcgctctggcacaacccgacctcgaggtggaaaccttcgagcgtgccgatcaggcc
gaagccagcatcatgcgtcagtgcccggatgtcctgatcaccgatatccgcatgcccgga
accgatggtctcgacctgatggcgcgcgtgcgcgagaagtacccggacctgcccgtcatc
gtgatgacggcgcattccgacctcgacagcgccgtggcctcctatcagggcggcgccttc
gaatacctgcccaagccgttcgatgtcgatgaagcgctggcgctggttcggcgcgccgtg
gcacatgcccgggaatccaaggcgcccgccgccgtgccggaaggactgaccaaggaaatc
atcggcgaagcgccggcgatgcaggaagtctttcgcgccatcggccgcctgtctcagtcg
catatcaccgtcttgatcaacggcgagtccggtaccggcaaggagcgcgtggcccaggcg
ctgcatcagcactcgccgcgcgccgccaagccgttcatcgcgctcaacatggccgcgatt
cccaaggacctgatggaatcggagctgttcggccacgagaagggcgccttcaccggcgcc
acggcgctgcgccgcgggcgcttcgagcaggccgatggcggcacgctgttcctcgatgag
atcggtgacatgcccgccgagacccagacccgcctgctgcgcgtgctggccgatggcgag
ttctatcgtgtcggtggcatcacgccggtcaaggtcgacgtgcgcatcatcgccgcgacg
caccagcacctggaaaagctggtcgaggatgggcgtttccgtgaggatctcttccaccgc
ctcaacgtgattcgcgtgcatctgccgcgcctgtcggagcgtcgcgaagacattccgcgc
ctgatgagccacttcctgggcgaggccgcgcgtgagctgtcgaccgagcccaaggtgctg
acggaggccgcggagaaacacctgacgcgcttcgactggccgggcaacgtgcgccagctc
gagaacacctgtcgctggctgacggtgatggcctcggggcgtgaagtgatgatcgaggac
ctgccgccggagctgcgcgatgccagcggcaccgaggcggcctccggcgattggcgtggt
gccttccgcgagtgggcggaccgcgcactcgccgccggccacacccatctgctggaagag
gcggtgcccgatttcgagcgcatcctgatcgagacggctctcaagcataccggtggccgc
aagggcgaagccgccgagctgctgggctggggccgcaacaccctgacccgcaagctcaag
gtgctgctgccggcgctggccgaggactga
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