Cardiocondyla obscurior: 139101227
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Entry
139101227 CDS
T10704
Symbol
Hrg
Name
(RefSeq) poly(A) polymerase type 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139101227 (Hrg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139101227 (Hrg)
Enzymes [BR:
cobs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
139101227 (Hrg)
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
139101227 (Hrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Polbeta
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
139101227
NCBI-ProteinID:
XP_070510337
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All DBs
Position
LG03:4496746..4507494
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AA seq
620 aa
AA seq
DB search
MWSTQSNNNSNANAASSEKNNLRTLGMTSAISVAEPKPVDIARTNELKEALKPYNVFESE
EELNHRMEILSKLNALVKQWIRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADID
ALCVVPRHIYRSDYFTSFFELLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTL
KEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHG
IYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNL
GYPVWDPRVNVSDRYHLMPIITPAYPQQNSTFNVSGSTRTIMQEAFENGLAITEEIIMGK
ATWDKLFEPPNFFGKYKHYIVLLAKSSSAEDQLEWCGLVESKIRHLIGMLERNAHITLAH
VNPEAFPPLNPESGKQCSMWFIGLAFAKCEKSEKSEKSENINVDLTYDIKSFVDTVERQA
EQINMFKDGMSIEAKHVKRKDLHTYVSPSLLKKERKVSSGVHRNGNIAGNGNGGSVSPRN
QGDTSGKKRLSDQTLDACGKKRRINEAEEQTENSTLVVQSCGEDSNSGFSMDEYKPNLST
NKDEGPTGATTVAQEGFVCT
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgacgcaaagtaataataattccaatgcgaacgcggcgtcgagtgaaaagaat
aatctacgtactttgggaatgacatcggctatcagtgtagctgagcccaaacctgtagac
attgccagaaccaacgaattgaaggaggccctgaaaccctacaatgttttcgaatctgag
gaagagttgaatcataggatggagattttaagcaaactgaatgcattggttaaacaatgg
ataagggatacaagtatagctagaaacatgccacctaatgtagctgaacaagtgggtggc
aagatatacacgtttggttcatataggttaggtgtgcatcacaaaggtgctgatatcgac
gccctgtgtgttgtaccacgtcatatatatagatccgattattttacgtccttttttgaa
ttattgaaaatgcaggaggaagttacagatttaagggcagtggaagaagcctttgtacca
gttataaaaatgaactttgatggcatagaaattgacatgctatttgcgaagttaactctt
aaagaaattccagattcgatggatctcagggatgatatgctactaaaaaatcttgatcag
aagtgtgtcagaagtcttaatggttgtagagtgacagatgaaatattgcgtttagtacct
aatatagaaaatttcagattggctctaagagctataaaattatgggcaaaacgacatggc
atatatagtaatgttttgggttatcttggtggtgtatcttgggcaatgttagtcgctcga
acatgtcaactttatcctaatgccgtggctgcaactctaatagaaaaatttttccttgta
ttctctcaatggaagtggccacaaccagtacttctaaaacaacctgataatgttaactta
ggttatccagtttgggatccaagagttaatgtatcggacagatatcatttgatgccaata
attacaccagcgtatcctcaacaaaactctaccttcaatgtatccgggtcgaccagaact
attatgcaagaagcatttgaaaacggattagctataactgaggaaattatcatgggtaaa
gcaacgtgggataaattgtttgaaccgccaaattttttcggcaaatacaaacattacatt
gtattgttggctaaaagttcaagcgccgaagatcaacttgaatggtgcggtctagtcgag
tcaaaaatacgacatttaataggcatgttggagagaaatgcccatattactttggcacat
gttaatccagaggcgtttccgccattaaatcccgaatcgggcaaacagtgttctatgtgg
tttatcggtttggcttttgctaagtgcgaaaaaagcgaaaaaagtgagaagagcgagaat
attaacgttgatcttacatatgacatcaaatcctttgtagatacagttgagagacaagca
gaacaaataaatatgttcaaagatggaatgtcgattgaggctaaacatgttaaacggaag
gatttacatacttatgtatcgccaagtttactaaaaaaggagagaaaagtttctagcggt
gtacatcgaaatggtaatatcgctggaaatggaaacggtggtagcgtgtcgccgcgaaac
caaggtgatacaagcggcaaaaagagattatcagatcagacgctcgatgcatgtgggaag
aaacgacggattaatgaggcagaagagcaaactgagaattcaacgttagtcgttcagtct
tgcggagaggatagtaattctgggttcagcatggacgaatacaaaccgaatctgtcaact
aataaggacgaaggacctactggtgcaactacagtagcacaggaaggattcgtttgcaca
tga
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