KEGG   Cardiocondyla obscurior: 139101240
Entry
139101240         CDS       T10704                                 
Symbol
Cdc5
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cobs  Cardiocondyla obscurior
Pathway
cobs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cobs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139101240 (Cdc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cobs03041]
    139101240 (Cdc5)
   03400 DNA repair and recombination proteins [BR:cobs03400]
    139101240 (Cdc5)
Spliceosome [BR:cobs03041]
 Complex B
  Other components
   Prp19 complex
    139101240 (Cdc5)
 Complex C
   Prp19-CDC5 complex
    139101240 (Cdc5)
DNA repair and recombination proteins [BR:cobs03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    139101240 (Cdc5)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 139101240
NCBI-ProteinID: XP_070510379
LinkDB
Position
LG01:1189396..1193336
AA seq 789 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKK
TEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEFLLDQAQKKEEGDDAVDDP
RKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGITVSQKNKRKRGVNYNTEIPFEKRPASGFYDTSNEHVDPLAIDFS
RMRQQHLDGELRQEKEEMERRKDKQKLKQRKENDIPMGMLNNEEPVKKRSKLVLPEPQIS
DQELQQVVKLGRASEVAREVATESGITLSDSLLADYSLPTNASVTPRTPAATDRILQEAQ
NVMALTHVDTPLKGGLNTPLNNPDFTGAVPPTNVVATPNTILATPFRSQRSDGTPINSFN
TPGAASVRTQNGVLAATPVRDKLNINPDENMDGSETPLIQTQSKNSLRTVLSSLPAPCND
YEIDIYDGEMNEESTNTPATEIIEDQADIDARQQQELLEEKKRELARRSQVIQRELPRPA
DINTNILRPYMDTPLTDLQRAEELIKREMITMMYYDALHNPTQSNRKSAAQSLAQSQNYL
EQHPYDIFDENDLVNAKKMLTDEMGVVKEGMAHGELSLDAYTTVWEECLSQILYLETQKR
YTRATLASKKDRVEACERKLEENRMHMTGEAKRAARMEKKLKVLTGGYQTRAQVLTKQLH
DVWEQIEQAHLEQSTFKFLQTQEEAAIPRRINALMEDVNRQTERERSLQMRYAQLQDQLQ
QCRINDKSS
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgataaagggtggtgtctggcgaaatacagaagatgaaatcttgaaa
gcggctgtgatgaaatatgggaaaaatcaatggagccgtattgcatccttgttgcacaga
aaatcagccaagcagtgtaaggctcgttggtttgaatggctagatccaagcataaaaaag
accgaatggagccgagaggaagatgaaaagttgcttcatcttgcaaagctaatgcccacc
caatggcgaacaattgcacctatcattgggcgaacggctgcacaatgcttagaacgatat
gaatttctactcgatcaagcgcaaaaaaaggaagaaggagatgatgctgttgatgatccc
cgtaaacttaaacctggcgaaattgatccaaatcccgaaacaaagccagcaagaccagat
cctaaagatatggatgaggatgaattggagatgctttccgaggcgcgagctagattggca
aatactcaaggaaagaaggctaaacgtaaggcgcgtgaaaagcaattggaagaggcgcgc
aggctggctgctttacagaaacgtagagaattgagagctgccggtatcacagtttctcaa
aagaataaacgaaaacgtggtgtaaactataatacggaaataccatttgaaaaacggccc
gcatccggcttttacgatacctccaacgagcatgtcgatcctttggcgattgacttttct
agaatgagacagcaacatctggatggtgaattacggcaggaaaaggaagaaatggagcgc
aggaaagacaagcagaaattgaaacagcgaaaggaaaacgatatacctatgggtatgctc
aataatgaagagcctgtgaaaaagaggagtaaattagtcttaccggaaccacagatttcc
gatcaagaattgcagcaagttgtaaaacttggcagagcttcagaagtcgcacgagaagtt
gccactgagagcggtattacactttcggatagcttattggctgattattccttacctaca
aatgcatcggtaacacctcgtacaccagccgccacagacagaatattgcaagaagctcaa
aatgtcatggctcttacgcacgtggacacgccgctaaaaggtggattaaatactccatta
aataatcccgattttaccggagctgtaccccctaccaatgtcgtcgcaacaccaaataca
attttggcaactccgtttagatcgcaacgtagcgatgggacgcccataaactcgtttaac
acgccaggcgcggcatcagtacgaacgcaaaatggagttttagcggctacacccgttcgc
gataagcttaatataaatcccgatgaaaatatggatggctcagaaactcctctgatacaa
acgcaatcaaagaattcgttgcgcacggtattgagttccttaccagcgccatgtaatgat
tacgaaatagatatttatgacggagagatgaacgaagaaagtactaatacgcctgcaact
gagataattgaggatcaagcagatattgatgcgagacaacagcaagaattgttagaagaa
aaaaaaagagaattggctcgtaggtcgcaagtaattcaaagagaattaccacgacctgcg
gatataaatacgaatattttgagaccgtatatggatacaccgttgactgatctacagaga
gcggaagaattgataaaaagagaaatgattacaatgatgtactacgacgcgctgcacaat
ccaacacagtcaaatcgaaagagcgccgcgcaatcactagcccagtctcaaaattattta
gaacagcatccatacgatatttttgatgaaaatgacttagttaatgcaaagaaaatgttg
accgacgaaatgggagttgtaaaagaaggaatggcacacggagaattgagtttagatgcc
tatactactgtatgggaggaatgcctgtctcagattttgtatctcgaaacgcaaaaacgg
tacacgcgtgcaacactcgcttcaaagaaagatagagtggaggcgtgcgaaagaaaatta
gaggagaatcgtatgcatatgacaggtgaagctaaacgcgccgcgaggatggaaaagaag
ttgaaagtactgaccggaggctatcaaaccagagcgcaagtattgacgaagcagctccac
gatgtgtgggagcaaatagaacaggcgcatcttgaacaatcgacgttcaagtttttgcaa
acgcaggaagaagcggcaattccgagaagaataaatgcgctcatggaagatgtgaacagg
caaacggagcgggaacgttcgctacaaatgcgatatgctcaattgcaagaccagttgcag
cagtgtcgaataaacgataagtcatcttag

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