Cardiocondyla obscurior: 139101330
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Entry
139101330 CDS
T10704
Symbol
Smf
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139101330 (Smf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139101330 (Smf)
03041 Spliceosome [BR:
cobs03041
]
139101330 (Smf)
03032 DNA replication proteins [BR:
cobs03032
]
139101330 (Smf)
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
139101330 (Smf)
Spliceosome [BR:
cobs03041
]
Complex A
U1 snRNP components
Sm proteins
139101330 (Smf)
U2 snRNP components
139101330 (Smf)
Complex B
U1 snRNP components
139101330 (Smf)
U4/U6.U5 tri-snRNP components
139101330 (Smf)
Complex C
U2 snRNP components
139101330 (Smf)
DNA replication proteins [BR:
cobs03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
139101330 (Smf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
139101330
NCBI-ProteinID:
XP_070510474
LinkDB
All DBs
Position
LG03:complement(5003443..5003853)
Genome browser
AA seq
88 aa
AA seq
DB search
MAATMPINPKPFLNGLTGKPVMVKLKWGHEYKGYLVSVDGYMNLQLANTEEHIDGNCTGN
LGEVLIRCNNVMYIRGVEESDEEGEMKD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaatgccaataaaccccaagccattcttaaacggcttaactggaaaaccc
gtaatggtgaaattaaaatggggccacgagtacaagggttacctcgtttcggtcgatgga
tatatgaatctacagttagcaaacaccgaagagcacatagacggtaactgcactggaaat
cttggcgaagtgcttataaggtgtaacaatgtcatgtatataagaggagtggaggaatca
gacgaggaaggcgagatgaaggactga
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