Cardiocondyla obscurior: 139101474
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Entry
139101474 CDS
T10704
Symbol
Vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139101474 (Vps50)
Membrane trafficking [BR:
cobs04131
]
Protein recycling
Others
EARP complex
139101474 (Vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
DUF6614
Motif
Other DBs
NCBI-GeneID:
139101474
NCBI-ProteinID:
XP_070510730
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Position
LG04:10864360..10869632
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AA seq
939 aa
AA seq
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MQSDIMEDLKIKFFDLIHKQNANKVPLMGLNPDLLNPPDSQKCEDLCSEADQSTESEPIP
DQDVLDSIEDVYFNTDGSFDSSRYELMKLPVILHSKEIEKCYKKLKQQHQVVSKKVLQLI
LQKRSDCEVESERIHLLQEQLQDALEICKMGRTDLQLAKNQLKSSLGILANYRRRQVVEE
LLKNLKTIKTLQCTGDRLKELLDEENYPGAISLLLECQSAVQTYKHFFCIAELNTNLQNI
LDQAEGILDNTLSKMCTEFDVTVYSSIQEAYTLLGKTQHAMDQLHMHFTAAIHHTAFAII
HHYAGGDVKRQYKQLCQAVPREKCIACLTELCKSLWTILNSYHLIVNWHNAQEDKVECKS
DVKDLEATLSKQYVKHKLEHGMVRVWHDVELKISIYLSNTDLTNTKFEQFVQVLGIVNRL
MEIGEDLCGVKLENLQESIKKQSLSYFSHYHACRLDELKMFLENDGWELCPVKSDFMATQ
LLEFRSLKPSLNNCKAWNSLDSSTLSDSDNSTGVDLQKYLESGLSPFTIGLDDTIDEDIL
INDDIDRPAYFSDESDEDIPDELKHDYVDELDHTKVNKKKCKLKQSGPMVTNTTLSVLRV
CGKYLQMSKLLRSIAVTVIQSMIQFFELCFYTVHQFFTSDLQINSDSLYSPKLKLSLTRI
RETLIISENESLEENGNLNYDKIRQPQLSSIVNLSQPEKLYGLTERIVAVESLIFLGQQY
EGLKPYLEHLIASSPQRGFLHQFYMQTIASAIDLRKPVYMAVTSQAFDVANILNLMNKVN
WEVTDVMSQHSNYIDALIHEVCILSERLNTIGTYIPLNVDICNAVWENVAHLITHTLVEG
FSNAKKCSNGGRALMQLDFTQLKSKFEKLTSLRPMPHREYVELYIKAYYFPENSFEEWIK
EHKEYSVKHLVGLISATCQNNRKTRQRLIALVEEQRPSR
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccgacatcatggaggatttaaagatcaagtttttcgacctcattcataagcag
aatgcaaataaagtgccgcttatgggcttgaatcctgatctgcttaatccacctgattca
caaaagtgcgaggacctctgctccgaagctgatcagtcgacagaaagtgagcctatacct
gaccaagatgtactagattccattgaagacgtttactttaacactgatggtagttttgat
tcgtcgcgctatgaattgatgaaattaccagtgatattgcattccaaggaaatagaaaaa
tgttacaagaaactcaaacagcaacatcaagttgtatctaagaaagttttgcagcttatt
ttgcagaagagaagcgactgtgaagtggaatccgaaagaattcacttgttgcaagagcaa
ctgcaagatgccttagaaatatgtaaaatgggaaggacagatctgcaattagctaaaaat
caattaaaatcgagtttaggcatattagctaattatcgaagacgacaagtggtagaagaa
ttgttaaaaaatttaaagactataaagaccctgcaatgcacgggtgatcgtttaaaagaa
cttctagatgaagaaaactatcctggagccatatcacttcttttggagtgtcaaagtgct
gttcagacttacaagcacttcttttgtatcgccgagctgaatacaaatttacaaaatata
ttagatcaagcagaagggatcttagacaatacgctctctaaaatgtgcactgaatttgat
gttacggtgtattcttctattcaggaagcatatacgttattaggaaagactcaacatgcc
atggatcaattgcatatgcattttactgctgccatacatcacacggcgttcgctattatc
catcactatgcgggaggtgacgttaaaagacaatataaacaattgtgtcaggctgtgccc
cgtgagaaatgtatagcttgcctcacggaattatgcaaatcattatggacaatactaaat
tcgtaccatttaattgtaaactggcataacgcacaagaagataaagtcgaatgtaaatcc
gatgttaaagatttagaggcaactttaagcaaacaatatgtcaaacataaattagaacac
ggtatggttcgagtatggcacgacgtggaattaaagatatcgatatatctgtcgaatact
gatttgacaaatactaagttcgaacagttcgttcaagtattgggtattgttaacaggctg
atggaaattggggaagacctctgcggtgttaaattagaaaacttgcaggagtctataaaa
aagcagtctctatcttacttttctcattatcacgcgtgtcgtttggacgagttaaaaatg
tttttagaaaatgacggctgggagctgtgtcctgtaaaatctgatttcatggccactcag
ttattagaatttcgaagtctgaaaccttcgctcaataattgtaaagcgtggaatagttta
gatagttcaactttaagcgacagcgataattctacaggagtcgatttgcagaaatatctg
gagagtggtttgtcaccatttacaataggattggacgatactatagatgaagatatttta
ataaacgatgatattgatcgacctgcgtatttttcggatgaatctgacgaagatattcct
gatgaattaaaacatgattacgtcgatgagcttgaccatacaaaagttaataaaaaaaaa
tgcaaactgaaacagtcgggacctatggtcacaaatacgacgttaagcgtattgagagta
tgcggtaaatatttgcaaatgtcgaagcttttacgatcgatcgcggttactgttatacag
agcatgatacaattttttgagctatgtttttacacggttcaccaattcttcacatcggat
cttcaaatcaatagcgactcgttatatagtccgaaattaaaattatctttaacccgaatc
agagaaactttgattatttctgaaaacgaatcgttggaagaaaatggcaatttaaattat
gataaaataagacaaccacagctttcgtccattgtgaatttgtcacagcctgagaaactt
tatggattaacggaacgtattgtagctgtcgagtctctgatatttttaggacagcagtat
gaaggtctgaagccttatttagagcatctcattgctagcagtcctcaaagaggattttta
catcagttttatatgcaaacgattgcgtctgccatagacttaagaaaaccagtctatatg
gcggtaacgtcgcaagcgtttgacgttgccaatattttgaatttaatgaacaaagttaat
tgggaagtgacagatgtcatgtctcaacacagtaattacatcgatgcactaattcacgaa
gtctgcattttgagcgagagattgaatactattggaacgtatatacctttaaacgtcgat
atatgcaatgcagtatgggaaaacgtggctcacttaatcacacatactttagtagaaggg
ttttccaatgctaaaaaatgttcgaatggtggtagagctttaatgcagcttgatttcaca
cagttaaagtcaaagttcgagaaattaacatcgttgagacctatgccacatagggagtac
gtcgaattatacattaaagcatattattttcctgaaaacagctttgaagagtggattaag
gagcataaagaatattccgttaaacacttagtcggactgatttcggcaacgtgtcaaaac
aatagaaagacgcgacaacgattgatagcgcttgtggaagaacagcgacccagcagatag
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