KEGG   Cardiocondyla obscurior: 139101713
Entry
139101713         CDS       T10704                                 
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
  KO
K10858  DNA mismatch repair protein PMS2
Organism
cobs  Cardiocondyla obscurior
Pathway
cobs03430  Mismatch repair
cobs03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cobs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    139101713 (Pms2)
   03460 Fanconi anemia pathway
    139101713 (Pms2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cobs03400]
    139101713 (Pms2)
DNA repair and recombination proteins [BR:cobs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     139101713 (Pms2)
SSDB
Motif
Pfam: MutL_C DNA_mis_repair HATPase_c_3 HATPase_c DUF7447 SecD-TM1
Other DBs
NCBI-GeneID: 139101713
NCBI-ProteinID: XP_070511180
LinkDB
Position
LG04:complement(10265417..10268275)
AA seq 672 aa
MDEPVATTEKSKKITAINKETVHRICSGQVVLDLAIAIKELVENSLDSCATVIDVKLIDY
GKTCISVSDNGSGVLERDFEGLGLKHHTSKLREFTDLTEVNTFGFRGEALSSLCALSELN
IVTRHTSSEHGFKLEFDRNGVLIKKEPCAREKGTTVHVRNIFKNLPVRAKEFQKNLKKEY
ARAIQVLYSYCLVSTGIKITCSNSTLGKSPNLVVATRNTHNVLDNINLVFGKKSLDGIVK
LELQSPDETTLQEYNLPNDIAIDFDWECYVSDCSHTVGRSSPDRQFFYVNGRPCDLTKIS
KLINTVYHKYNNKQYPFVFFNINLDRQCADVNVTPDKRTIFVTQERLILATVKFSLITKW
NKMQGNFTVKTLTELNSGLKRTISSQHNDPPAKRLQISTPTSHDVEESDIQTNIKSMKKP
ADVEMMISIATIKEKLNEKKNIISAPTSTAKKIKYRVQMEDKQSDAEKELQRELTKDSFD
QMEIIGQFNLGFIIARLEDDLFIIDQHATDEKFRFEKLSNETKLKTQKLIVPKSLNFSAV
NETILIEHQRIFEDNGFTFNINEEAESGKKIELVGIPVSGYWQFDQKDIEELIFLIREAG
NENKTKDIYRPSRVREMLASRACRSAVMIGTALNLSDMHKLITQMAQMHNPWNCPHGRPT
IRHLLSLLLIKK
NT seq 2019 nt   +upstreamnt  +downstreamnt
atggacgagcctgttgcaacaactgaaaaatcgaaaaagataacagctataaacaaggaa
acggttcatcgaatctgttccggccaggtagtgctcgatcttgcgatcgcgatcaaagag
ttggtagagaacagtttggacagctgtgctacggtgatcgatgtcaagctcattgattac
ggtaaaacgtgcattagcgtcagtgataatggtagcggcgttttggaacgagactttgaa
ggcctaggtttgaaacaccacacttcaaaactaagagaattcacagacttgaccgaagta
aatacattcggcttccgtggcgaagcgttgagttcactgtgtgccctgtccgagttaaat
atcgtcacgaggcatacatcaagcgagcatggctttaaattggaatttgaccgaaacggc
gtgttaataaaaaaagaaccatgcgccagagaaaaaggtaccacggtacacgtgagaaat
atattcaaaaatcttccggtaagagcaaaggagtttcagaaaaatctgaagaaggagtat
gctcgcgctatccaagttttgtacagttactgcttggtttccaccggcatcaagatcact
tgttcgaattcgacgttgggtaaatcgcctaatcttgtcgtcgccacaaggaacactcat
aatgtactggataatattaacttagtgtttggcaagaagtctttggacgggattgttaaa
ctcgaattacaatccccggacgaaacgacgttacaagaatataatttgcctaatgacata
gcgatagatttcgactgggaatgttacgtgagtgattgcagtcacacagtcggacgttct
tcgccagatcggcaatttttttatgtgaatggaaggccgtgcgatctcacaaaaatcagc
aaactgatcaataccgtgtatcataaatacaacaacaagcagtatccgtttgtcttcttc
aacattaatttagatcggcaatgcgccgacgttaacgttactcccgacaagaggacaata
tttgtgacgcaagagcgccttatattagcgacagtaaaattcagcttaattacgaaatgg
aacaagatgcaaggaaatttcacagtcaagactttaacggaattaaattctggtttgaaa
agaacaatctcatcgcagcacaatgatccgccagcgaaaagattacaaatatcgacgccg
acatcgcatgacgtggaagaaagtgatattcaaactaacattaaatcaatgaaaaagcct
gcagatgtggaaatgatgataagtatagcaacgataaaagaaaaattaaacgaaaaaaag
aatattattagcgcacctacgagcacagctaaaaaaataaaatatagagtacaaatggaa
gataaacaaagcgacgctgaaaaagaattgcaaagagaattgacaaaagattcattcgat
cagatggagataataggtcaatttaatcttggtttcataattgctcgtttggaggatgat
ttatttatcatcgatcaacacgccaccgatgaaaagtttcgctttgagaagcttagtaac
gaaacgaagctgaaaactcaaaaacttattgtaccgaagtcgctgaatttttctgcggtg
aacgaaaccatacttatagaacaccaacgaatattcgaagataatgggtttacttttaat
atcaacgaagaagctgagtctggtaaaaaaatcgaactagtaggaatacctgttagtggt
tattggcaattcgatcaaaaagatatcgaggaattgatatttcttattagagaagcaggc
aatgaaaataaaacgaaggatatatatcgtccaagtcgtgttagggaaatgttagcgtcc
agagcatgtcgtagcgccgttatgatcggcacagcgttaaatctgagcgatatgcacaag
ttgataacacaaatggcgcaaatgcataatccatggaattgtccacacggtagacccact
ataaggcacctattatctttgttattaataaaaaaataa

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