Cardiocondyla obscurior: 139101750
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Entry
139101750 CDS
T10704
Symbol
Dom
Name
(RefSeq) helicase domino isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139101750 (Dom)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobs03036
]
139101750 (Dom)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
139101750 (Dom)
SWR1 complex
139101750 (Dom)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
Motif
Other DBs
NCBI-GeneID:
139101750
NCBI-ProteinID:
XP_070511240
LinkDB
All DBs
Position
LG04:2952741..2981123
Genome browser
AA seq
2949 aa
AA seq
DB search
MSDKQGAPILPPLNRGAANNGGNNGNSTQQTVNLQHVLTTAQSLNVLSSGQQFVITTQVP
GLTQVVPNNATTNASGTQQIGVTRIVNITGTPPRNAVGVGIAGTSSHSSPTVSRPQNSTK
LMLTTSPKLVRTSISNVFMAPMSSSSQVSSPQVQVQSASPPARKRLKLSETTEKSVPFDA
SGYRKRILEHKMRRMRSVREKYADNASELFFLHAGGNMMDYHTWRKRSPTPQFIHFLRQH
RLDPDDDNEDLTAPLSSIPEFSHLSAFTTTVATTTTVTAATAIVTATTTVTTVTSGSTMV
QVPNQKTEVKITGTGVTPIAVSTALPAAALAQLSSHQGGTSVVADSVKSTTTATTPVVEK
SSPLVTTVATPKISATVALNNPQPIVKLVKLSTPTTITTSCDITNNQEQIVEKAKQEAYV
MQRIAELQREGLWSERRLPKVQEPTRTKAHWDYLLEEMVWLAADFAQERKWKKAAAKKCA
RMVQKYFQEKAIQAQKAEKSQELRLKKIASLVAKEIKTFWTNVEKLVEYKQQTRLEEKRK
KALDQHLNFIVGQTEKYSTWLTEGLNKTEGPQSIPASMNSSRISSPVPLGKCHSDEEFQP
NQSSDDDEETIAKAEEEMKLTTNHKEEVELLKKESEIPLEDLLKDLPPNYLEDRNRSLSP
QNATNEKPENETEEAVDADADFVVASGESSDEEDTIMEEEKLEGEIDHKRELDELKADNE
MSIDELAAKYANMSDVLMDMDEETEGTDKENSDKEAVLQEIEEQIITSDSESEESDHDSD
EEEVRTQSETEPDVGLQSLLEDPSAEKQPGSRVAEDDHSDAHNEMDNVAALAESIQPKGN
TLLTTSVVTKIPFLLKHSLREYQHIGLDWLVTMYDRKLNGILADEMGLGKTIQTIALLAH
LACEKGNWGPHLIIVPTSVMLNWEMECKKWCPGFKILTYYGTQKERKQKRTGWTKPNAFH
ICITSYKLVIQDHQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFQTQRRLLLTGTPLQ
NNLMELWSLMHFLMPNVFQSHREFKEWFSNPVTGMIEGNSEYNENIIRRLHKVLRPFLLR
RLKTEVEKQLPKKYEHVVMCRLSKRQRFLYDDFMSRAKTKETLASGNLLSVINVLMQLRK
VCNHPNLFEVRPTVSPFQMEAIEFVTASLIWSALDYDPFKHIQLSSLNLLLLDLEMRLSA
FIAHRVNRLRTPKKLIEEIDNQPEPAPRCPSGRIKINVRLSNQAKPPQQQQTQTRLKNLA
GVLPTPRVGTSPLIKSLNSSQSNPGQGVTLRVAGGQQLQGYSLQLVPHQGNVKAIPMATL
GHNPQSTTVTTTAATNAQRITVGNANIRDSIQRLTTQTVTVKQGDSVQRIAVPGFAQLVQ
TSTGRHFILTPSQQNTNTVSFPVMTSTGPRFTVLSKSLMGLSTSGAPTMNKVVSGVVTTP
SGRPVMRVPPLNVTASQSSSSGNNSQQIVHQQQSQSIRSIITRQAQKEITKTQNKEQPKS
EFYLPQLEEEKRQRRQAKLHLLANINERRCVACPLYGEDLFMALRIDKPSTACHWNNGWV
HCTTTKEKICTRKEFFSRTEALAEAIQSTEQIVEELKEVFERYVVYVPAVRAPVPRFHVS
HPPPYKLWGEQRLWNELQQQLSPKLSLLHPISSSMLTQFPDPRLIQYDCGKLQSLDRLLR
KLKSDNHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTRVDQRQVLMERFNGDKRIFC
FILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSEKTVE
ENILKKANQKRLLGDLAIEGGNFTTAYFKSSTIQDLFNIDQTENDASTRMAEVLEQNRDR
EKNWSKDLAVGSFQSNLSGQHTEEKAAIGALECALAAAEEDLDVQAAKTAKAEAVADLAE
FDENIPLEEVDKDDAQVSKAEQEVQNLIAQLTPIERYAMRFVEESEGAFSAAQLAAAERE
LEEQKKEWELDRLRALREEEERRMRLADDDEKPLTFGREDAQNQVNSTAAKSGSKRLVNK
RLIVPSRRSLRRRGGRRNRRTRNLSSESENETTSTESDSDSESQEEDVIEDSLDEESSHT
ESQSQGDEEEEGEDGEGDKEKEESDEEEEEAGEGNDDRKANNRNDSERGGFSRRKGRLAG
SGSSSRNHFDLNSPRTRSRGNVQINLWTLDVSPILPGVKPNFRRQRKKFHRAQSEETSSP
SLDDMCRKRNIRVNTNAKVSVNSNVKSEITEIEITNTDQSSSKYKRNQKKDNCELRSSSP
IDFNGEVEQHFTDSNAEQSVDDDDVDSTTSVTKMHSNEITSKSTSDNVVDDQSVKKEKEK
SDEKLMNDINLMSVCSVQVTRCSYKMLSAVNKKLEPEVNRNEDAENLDVNVSAKDSRSPS
STVQLDDSSFKCTKETAVKSEFNPLCTNTRKKLVIATSKESDKTVESPSNRSVPLLRSKM
LRNGSPDMIDTVSKPVSISRVSTVQRNSKTSINTDDICDNAVEDTDKNNCDRDNNESELA
TSSKQKSDQRLDSKNENINPSPQIAEKETNDTASNVSEFLMPLTKSEFNSSESKYKIRKV
EGIAQRGVVTRSSKIPSTVNHLEENNARLMNDKIDTVSESKYSTQTKVGQGMRKIDNLQH
PVAEQIRITRSTSHSWTPPLPPPNSGDEMTAPNSLKLTPRRRPDTPLPRPTTRSTNFSTR
METVLPSRVDKYTIRNPKHCQDNGMLSPPMPFRRSSSIPPIKPDSKEGPATRRPDTPRPN
IPPSHNNEQVSRVTRSGTLLTSSPLSSASALKITTKHTRTLSFNSEGENTTNLTSSYEKP
QRTAKVVAILSLDTRNNSSKTSSSHSKSIVNCETKIQDKELTASRLSDSLKEQETDEEIC
YSSNIKSKRLRKEIKRTKMPSNSLENEDTFNDVVEEDSSLKKSRSSQMSLSSSSVAITRS
DKLKDTTIS
NT seq
8850 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaacaaggtgcacctattttaccaccccttaatcggggtgcagctaataat
ggcggaaataatgggaattcaactcaacagactgtcaatctgcagcacgttcttactacc
gctcaaagcctcaatgtgctttctagtgggcaacagttcgttattacaactcaggttcct
ggtctcacacaggtcgtaccaaataatgctacaactaatgcgagtggaactcaacaaatt
ggtgtcacaagaattgttaacatcacgggcacaccgccgcgcaatgctgttggtgttggc
attgccggcacgtcatctcattcatcgccaacagtatcacgaccacaaaactcaactaag
cttatgctgacaacgtcgccgaaacttgtacgcacttccataagtaatgtgtttatggcg
ccaatgtcgtcatcgtcgcaagtctcgtcaccacaagtacaggtgcaatcagcttcacca
ccagcgagaaaacggttgaaattgtcggaaaccacagaaaaatcggttccatttgatgcc
agtggttatcgtaagcggatactggagcacaaaatgcggcgaatgcgcagtgtacgtgaa
aagtatgcagataatgcatcagagttattctttttgcacgccggtggcaacatgatggat
tatcatacttggcgaaagcgatccccgacaccacagttcatacactttctgcgtcagcat
cgacttgatccggatgacgataacgaagatctaactgcaccactatcatcaataccggaa
ttttcgcatctgtctgcttttactactactgtcgctaccactacgactgttactgctgct
accgctatcgttacagctaccaccaccgtcacaactgttacatctggttctacaatggtt
caagttccgaatcaaaaaacggaagttaaaatcactgggacaggtgtcacgccgatagca
gtatccaccgccctacctgctgcagctctagctcagctcagcagccatcaagggggaacg
tcagtagttgcggactcggtgaaatcgacgactacggccacgactccggtagtggaaaag
tcatcaccgttggtcaccaccgtcgctaccccgaaaatatctgcaacagttgcgctcaat
aatccccaacctatcgttaagctcgttaagttgtctacacccactactataactacttcc
tgtgatatcacgaacaatcaggagcaaattgtggaaaaagctaagcaggaggcgtacgta
atgcaaaggattgcggagttgcagcgcgaaggattgtggtcggaacgacgattgcccaaa
gtgcaagaaccaactcgaaccaaagctcattgggattatctgttggaagaaatggtctgg
ttggccgctgatttcgcccaagaacgtaaatggaaaaaagcggcagcgaaaaaatgtgca
cgaatggtgcagaagtactttcaggaaaaagcaattcaggcacagaaagctgagaaatcg
caggagcttcgattgaagaaaatagccagcttggttgcaaaagagatcaaaactttttgg
acaaatgttgagaaattggtggagtataagcagcaaacaaggctggaagagaaacgaaag
aaggcgttggatcaacatttaaattttattgtgggtcaaacggaaaaatattccacgtgg
ttgacagagggtctcaataagacggaaggtccacagagtattccagcttctatgaatagt
tcgcgtatttcttcaccagttccactaggaaaatgtcattccgatgaggaatttcaacca
aatcagagttctgatgacgatgaggaaaccatagctaaggctgaagaggaaatgaaatta
acgaccaatcacaaagaagaagtagagttactgaaaaaagaatcagaaataccgttagaa
gatcttttaaaagatttaccaccaaattatttagaagaccgcaacagaagcttatcgcca
caaaatgcaacgaatgaaaaaccggaaaatgaaacagaggaagccgttgatgcagatgca
gactttgtcgtagcgtctggtgaatcctcggatgaagaagatactatcatggaagaagaa
aagctcgaaggagaaattgatcacaaacgagaactcgacgaacttaaagctgataatgaa
atgtctatcgatgaactcgcagctaaatacgcaaatatgtcagacgtgttgatggacatg
gatgaagaaactgaaggtacagataaagaaaatagtgacaaagaggccgtgctgcaagag
attgaagaacaaataattaccagtgacagtgaaagcgaagagagcgatcacgatagcgat
gaagaggaggttcgaactcagagtgaaaccgaaccggatgtaggacttcaatctcttctc
gaagatccctctgcagaaaaacaacctgggagtagagttgcagaagacgatcattcagat
gctcataatgaaatggataatgttgctgcattggctgagagcatccagcctaaaggaaat
acactacttactacaagtgttgttactaaaatacctttccttctgaaacattctcttcgg
gagtatcagcatataggattggattggctcgtcactatgtacgatagaaagttaaacggc
attttagctgacgagatgggtttaggtaaaactatacaaacaatcgcactgttggcacat
ttggcctgtgaaaagggaaattggggaccgcatcttataattgtgccaacctctgtgatg
ctcaattgggaaatggaatgtaaaaaatggtgtccaggatttaaaatactgacatactat
ggcacacaaaaggaaaggaaacaaaaaagaactggttggacaaagccaaatgccttccat
atatgtattacatcttacaaattagtaatacaggatcaccaaagttttagacgaaaaaaa
tggaaatacctcattttggatgaggcacagaatattaagaattttaaatcgcaacgatgg
cagttacttttaaacttccaaacacaaaggagattacttctcactggcacgcctcttcaa
aacaatttaatggaactatggtcacttatgcactttcttatgcctaatgtttttcagtct
catcgcgaatttaaagaatggtttagcaatcctgtcacaggcatgatcgaagggaatagc
gaatacaacgagaacataattcgtcgtctgcataaggtgttacgaccatttcttttgaga
cgattaaaaaccgaagtggaaaaacagttaccgaaaaaatatgaacatgtagtcatgtgc
cgtttgtcaaaacgtcaaagatttctatatgatgattttatgtcgagggctaagacgaag
gaaactcttgccagcggaaatctgttgagtgtgataaacgtattaatgcaactacgaaaa
gtgtgtaatcatcctaacctatttgaagtgcgacctacagtttcaccatttcaaatggaa
gcaattgaatttgtaacagcctcgttaatctggagtgcgctcgattatgatccttttaag
catattcaactgtctagcctgaatcttttactattagatttggagatgaggcttagtgca
tttattgcgcatagagtgaaccgtctgcggacgcccaaaaagttaatcgaggaaatagat
aatcaaccggaaccggcgcctaggtgtccatctggtcgaatcaagatcaacgttagatta
tcgaatcaggcaaagccgccgcaacaacagcaaacgcaaaccagactaaagaatctggct
ggcgtattacccacgccaagagtgggtacgtcccccttgataaagtcattaaatagcagc
cagagtaatccgggacaaggtgttacattgagagtcgcaggaggtcaacaattacaaggt
tattctctccaactggtgccgcatcagggtaacgtaaaagctattcctatggcaacattg
gggcataatccgcaaagtactacggtaacaactacggcagcgacaaatgcacaaagaatc
acagtgggaaacgctaatatcagagatagcattcaacgactaacgacgcagactgtcaca
gtcaaacaaggcgattccgtccagagaatagcggtgcctggtttcgcgcaacttgttcaa
acttctaccggcagacactttattttgacacctagtcaacaaaatactaacacagtttcg
tttccagtcatgacgtcgactggaccgcgttttacggtactgtctaaatcactgatgggt
ctgtcgacatcgggtgctcctacgatgaacaaagtcgtcagtggagtggtaacaactccg
agtggtcgacctgtcatgagagtaccacctttaaatgtaactgcctcacaatcgtcgtca
agcggaaataacagccagcaaatagttcatcaacaacaatcacagtcaatacgtagcatt
atcacaagacaggcgcaaaaggaaattacaaaaacacagaataaagaacagcccaaatct
gagttttatttgccgcaattggaagaggaaaagagacaaaggagacaagctaaattgcat
ctcctggcgaacatcaatgaacgaagatgcgtggcgtgtccgctctatggggaagatctg
tttatggctttgagaatcgacaagccttcgacagcctgtcattggaacaatggctgggta
cattgtacaacaactaaagaaaaaatttgtactcggaaggaattcttttcgcgtacggag
gcgctcgcggaagccattcaaagtacggaacaaattgttgaagaactcaaagaggttttt
gaaaggtatgtagtctacgtgccggctgtacgtgcgcctgtacctcggtttcatgtgtcc
catccaccaccatacaagctttggggtgagcagcgtctatggaacgaattgcagcaacaa
ttatcgccaaaattgtccttacttcatccaatatcgagttccatgctcacgcaatttccc
gatcccagactgattcaatatgattgcggtaaattacaatcactggatcgtctattgagg
aagttgaaatctgataatcatcgggttctcatattcacacaaatgaccagaatgttagat
gtattagaagcctttttgaattttcatggacacatatatctgcggttggatggtactact
agagtggatcaacgtcaggttttgatggagagatttaacggtgataagcgaatattttgt
tttattctgtcaacgagatctggtggtgttggtgtgaatttgacaggagcagacacagta
atattttatgacagcgattggaatcctacaatggatgcccaggcgcaagatagatgtcac
agaatagggcaaacgcgagacgtacatatctacagattagttagtgagaaaactgttgaa
gagaacattttgaaaaaagcaaatcagaaacgattgctaggagaccttgctattgaaggc
ggcaatttcacaacagcgtacttcaaaagttccactattcaagatctatttaacatcgat
caaaccgagaatgatgcatcgacgcgtatggctgaagtgctcgagcaaaatcgggatcga
gagaagaattggagtaaggacctagcagtaggatcatttcagagtaatctttcaggacag
catacagaagaaaaagcagcgatcggcgctcttgaatgtgctctcgctgctgctgaggaa
gatcttgatgttcaagctgcaaaaacggcaaaagctgaagctgttgccgatcttgcagag
tttgatgagaacattccgctggaagaagttgataaggacgacgcgcaggtcagcaaagca
gaacaggaagttcagaatctgattgctcagttaactccaatcgaacggtacgctatgaga
tttgtcgaagaatccgaaggagcgttctccgcagcacaattggccgcagccgaacgggag
cttgaggagcagaaaaaggaatgggaactggaccgattacgagcactgcgtgaggaggag
gagcggcgtatgagacttgctgacgatgacgagaagccactgacgtttggacgtgaggat
gcgcaaaatcaggttaatagcaccgctgctaaaagcggttctaagcgattagttaataag
agattaatagttccgagtagaagaagtttacgtagacgcggcggtaggcgaaacagacgc
acacgcaatttgtcatcagaaagcgaaaacgaaactactagtacagaatcggactctgat
tcggagtcgcaggaggaggacgtaattgaggatagtcttgacgaagaatccagtcacaca
gaaagtcaaagtcaaggagatgaggaggaagaaggagaggatggtgaaggagataaagaa
aaagaagagagcgacgaggaggaggaagaggctggtgaaggaaacgatgacaggaaggcg
aataatcgcaatgattccgagcgtggaggtttttcgagacgaaagggccgcttagcgggt
tctggctcaagcagcagaaatcatttcgatttaaacagtccacgtactagatctcgtgga
aacgttcaaattaatctctggactctggacgtgagtccaatcttacctggtgtaaaaccg
aattttcgccggcaacgcaagaaatttcatcgtgcacaatccgaggaaacctcttcaccg
tcgttagatgacatgtgtcgtaagagaaatattcgtgtcaatacgaacgccaaagtatcc
gtcaattcaaatgtaaaaagtgaaatcactgaaatagaaataacaaataccgatcaaagt
tcgtcaaaatacaagagaaatcaaaagaaggacaattgcgagcttaggtcatcatctccg
atcgatttcaatggagaagtagagcaacattttactgattctaacgcggagcaatctgtc
gacgatgatgacgtggattcaacaacatcggttaccaaaatgcattcaaatgaaataact
tcaaaatcaacttctgataatgtagtagacgatcaaagtgttaaaaaagagaaggaaaaa
agtgatgagaaattaatgaacgatattaatttaatgtcagtttgttccgttcaagtaaca
cgttgttcgtataaaatgttatcagcggttaacaagaagctcgaaccggaggtaaatcgt
aatgaggacgcggaaaatctcgacgtgaatgtcagcgcgaaagattctcggtctccttca
agcactgtgcaactagatgattcgtcttttaaatgtacgaaggaaacggcagtcaagtct
gaattcaatcctttgtgtacgaacacacgaaaaaaattggttattgctacgtcaaaagaa
tctgacaagactgttgagtcaccctcgaatcgttcggtgccccttttgcgatcgaaaatg
ttgcgaaacggaagtcctgatatgattgacacagtctctaaaccggtttccatatctcgc
gtttccactgtgcagagaaattccaaaactagtataaatactgatgatatttgtgataac
gcggttgaggatacagataagaacaattgtgatagagataataatgaatccgaattagca
acatcttcgaagcagaaatctgatcagagactcgattcaaagaatgaaaatataaatcct
tcaccacaaatagcggaaaaagaaacaaatgacacggcgtcgaatgtgtccgaatttttg
atgcctttaacaaaaagcgaatttaattcgagtgaatctaaatataaaatacgaaaagta
gaaggcatagcccaacgaggcgtcgtgactcgtagctccaaaattccatcaactgtcaat
catctagaagaaaataatgcgcgtttaatgaacgacaaaatcgatacggtatcggaaagt
aaatatagtacgcaaacgaaagtaggccagggaatgcggaaaattgacaatttacagcat
ccagttgcggaacagatcagaatcacacgatcaacaagtcactcgtggacgcctccactt
ccacctccaaatagtggcgatgagatgacggcgccaaattcattaaaattaacaccgaga
cgacgaccagatactcctcttccgcgaccaaccacgaggtccacgaacttttctacaaga
atggagacggtattgcctagtcgagtcgataagtatacaattcggaatccgaagcactgc
caagataatggcatgctgagtcctccgatgccgtttagacgtagtagttcgataccaccg
attaaaccggattcgaaggagggtccggcaacacgccgtccggatacaccccgacctaac
ataccgcccagtcacaacaacgaacaagtatccagagtgacgcggtcgggaacgctgtta
acatcgtcgcctttgtcttctgcatccgcacttaaaataaccactaaacacacgcgaact
ctatcgtttaacagcgaaggcgagaatactacgaacttaacgtcatcttacgagaagcct
caaagaacagccaaagtcgtcgctattctctctcttgacacgagaaataacagcagtaaa
acctcatcgagtcactctaaatccattgtcaattgcgaaacgaagatccaagacaaagaa
cttactgcgtctcgattgtcagactcgctgaaagaacaagagactgatgaggagatctgc
tattcgtccaatattaagtcgaaaagactgcgtaaagaaattaagcgcactaaaatgcca
tcaaattcgctggaaaacgaagacacttttaatgacgttgttgaagaagattcatcattg
aaaaaatctcgctcttcacaaatgtccctctcgtcctcctccgtcgcaataacgcgatcc
gacaaattgaaggataccacgatatcttga
DBGET
integrated database retrieval system